Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02776 ATGGACCCATATGCAAAGAAGCCACGTGGCAGGCCCCCAGGCTCTAGGAATAAGACAAGCTCCACCTCTCACCTTACGCCCAAGCCTGATGACACCTCCATGAAGGTATTCACTTTAAATGTACCTCCGAATAGAGACATCATGGAGTTCATCTTTGACGTTGCTCACAGGGACAACGTTAATGTTACTGTCCTTAGTGCTTCTGGCACGGTTAACAATGTGACCCTACACAACTTCACCCATGGTGCCCATGAGACCATGATGGATGGACCTTTCACCTTACTCTCATTTTCTGGTACCTACTTATACACCGACCACGACACCCTTCTCTCTGGGGCTACCCCTCCCTTTCCCCTATCTTTTGGGATAAACATTTCCTCCTCCCATGGCCAAATCCTCGGCGGTGTGATCGGTGGTAGTGTCATCTCCGGTGACAATGTCTCTCTCACGATCTCCACCTTCAAGAACCCTGGTGTTTTAAACTACACTTTTGAAGGAGAAGACAAGTATGCCAACAATAACAACAATGATAACATCAATAGCAGTGATTTCGGTGGGGATGACAACTTGTTAGGGCTCAACACTGGAGTTCGTGGGTGGAGTGGAATAAGATCAGGGTTGTTCACAACTTTTGATTTGCTTGTTTTTCTTTTGGGGTGA 660 0.4712 MDPYAKKPRGRPPGSRNKTSSTSHLTPKPDDTSMKVFTLNVPPNRDIMEFIFDVAHRDNVNVTVLSASGTVNNVTLHNFTHGAHETMMDGPFTLLSFSGTYLYTDHDTLLSGATPPFPLSFGINISSSHGQILGGVIGGSVISGDNVSLTISTFKNPGVLNYTFEGEDKYANNNNNDNINSSDFGGDDNLLGLNTGVRGWSGIRSGLFTTFDLLVFLLG* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02776 219 Gene3D - 33 170 - -
Lapu6g02776 219 Pfam Plants and Prokaryotes Conserved (PCC) domain 36 155 IPR005175 -
Lapu6g02776 219 CDD DUF296 35 144 IPR005175 -
Lapu6g02776 219 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 5 176 IPR014476 GO:0003680
Lapu6g02776 219 ProSiteProfiles PPC domain profile profile. 31 176 IPR005175 -
Lapu6g02776 219 MobiDBLite consensus disorder prediction 1 34 - -
Lapu6g02776 219 SUPERFAMILY AF0104/ALDC/Ptd012-like 32 156 - -
Lapu6g02776 219 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02776 Lapu-Chr6 29668172 29668966 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02776 6 201 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 33.838 1.19e-25 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02776 - - pvu:PHAVU_006G031200g 208.764