Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02773 ATGGCAACCGCCGGTGAGGAGAAAATGGCTATGTTAGGGCTGGTCGCCAAGAAGCTCGGCCGGTCCATTGACCGAACTTCGAGGATTCCGAAGGAAGTTCATCGCGTGAGCCAAGGAAGAAAGAGGTCGCGAAAAGCACCAGAGGCAGAAGGGCAAATAGGGCACAAAAAAGGGAAGCTGCTGATAAGTTTTCGTAATGGCAACAGCCAGTGGAGAAACAATGGCTATGATAGGGCTGGTCGCCAAGAAGCCCGACCGGTTCATCGATCGAACTTTCAGGATTCCGGAGCAAGTTCATTGCGTGAGCTAAGGAAAAAAGAGATCAGGAAAAGCACCACAGGCAGAAGGGCAAAGCGAGCACAGGAAAGGGAAGTTGCTGATAAGACAGCTGAAACAAAACATCAGCTGCATCTAGTAAGGCTGGGTAGGAAATGA 435 0.5057 MATAGEEKMAMLGLVAKKLGRSIDRTSRIPKEVHRVSQGRKRSRKAPEAEGQIGHKKGKLLISFRNGNSQWRNNGYDRAGRQEARPVHRSNFQDSGASSLRELRKKEIRKSTTGRRAKRAQEREVADKTAETKHQLHLVRLGRK* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02773 144 MobiDBLite consensus disorder prediction 25 144 - -
Lapu6g02773 144 MobiDBLite consensus disorder prediction 25 55 - -
Lapu6g02773 144 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 63 144 - -
Lapu6g02773 144 MobiDBLite consensus disorder prediction 99 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02773 Lapu-Chr6 29570643 29571873 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02773 63 144 C3H Transcription Factor Family AT5G19430 52.174 4.99e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02773 - - vum:124820492 122.864