Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02772 ATGCTAATTCAAGCTCGGCCGGTCCATCGACCGAACTTCCAGGATTCCGGAGCAAGTTCATCGCGTGAGCCCAGGAAGAAAGAGATCGGAAAAAGCACCACAGGAATAAGGGCAAAGAGAGCACAGAAAAGGGAAGTTGCTCATAAGGCAGCTGAAGCAAAACATCAGCTGCATCTGAATAATGATAATAATAATTACGAAGATGCATACGAGGCGATAGAGGATTACTATCAATATCAATACGAGGACGAAGATATGGATGAAGCTTACTATGGTGGTTCGTCTAGTTTTCGTAATGGCAACTGTCGGTTGGGAGACAATGGCTATGTTAGGGCTGGTCGCCAAGAAGCTCGGCCTGTCCACCGACAGAACTTCCAAGATTCTGGAAAAAGTTCATCGCGTGAGCCGAGGAATAAAGAGATCGGGAAAAGCACCACAGGCAGAAGGGCAAAGAGAGCACAGAAAAGGGAAGCTGCTGATAAGGCAGCTGAAGCAAAACATCAGTAG 507 0.4694 MLIQARPVHRPNFQDSGASSSREPRKKEIGKSTTGIRAKRAQKREVAHKAAEAKHQLHLNNDNNNYEDAYEAIEDYYQYQYEDEDMDEAYYGGSSSFRNGNCRLGDNGYVRAGRQEARPVHRQNFQDSGKSSSREPRNKEIGKSTTGRRAKRAQKREAADKAAEAKHQ* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02772 168 MobiDBLite consensus disorder prediction 20 56 - -
Lapu6g02772 168 MobiDBLite consensus disorder prediction 1 66 - -
Lapu6g02772 168 Coils Coil 148 168 - -
Lapu6g02772 168 MobiDBLite consensus disorder prediction 89 168 - -
Lapu6g02772 168 MobiDBLite consensus disorder prediction 132 168 - -
Lapu6g02772 168 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 4 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02772 Lapu-Chr6 29567892 29570237 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02772 95 168 C3H Transcription Factor Family AT5G19430 57.143 5.94e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02772 - - vum:124820492 109.383