Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02767 ATGGAAGAAGCAACTGAGATGCAATCAGAAGAAAATAATTTTTCTATGGAGAAAAATAAGAAAAGAAGGCTCAAAACACCTGCCCAGCTTACGGCCTTGGAAATTTTTTATAACGATCACAAATATCCCACCGAGGAAATGAAATCAGAACTTGCTGAAGAGTTAGAGTTGACAGAAAAGCAAATATCTGGATGGTTTTGCCACAGAAGATTGAAAGATAAAAAGTTGTTGAATGATGAAGTAGGTGCCAATGGACGACAAGATCGTTCAAGTGGTGTTATCCAGGATCGTGGCAGTGGTCTAATGCAGGACTCATGTGGAAGCACTAAACATGGCGATTATAGGTATCTGGATCCAAAAGAGGTTGAGAGTCATGGCCTCTATAACCATGAATTTTCAGCTGCAGACATGACCTATGCACACAGGAACCATCATTATACAGAAAATGATAGTGCAACAGATAGCACATCATCTGAGAGTAGCTCATCTTTGCAAGAGCGATTGCTTCCTCAAGGACAGGAGCCATATGATACGGAGCCTTCTAGTCATTTGATGCCTAACGGGTCTCTTCCACCCTTGAATCCCAAGGGTGCAAATAACATGGGATATAAACCATCAGGATATTTAAAAGTGAAGGGAGAGATAGAACATGTTGCTATTACTGCTGTCAAAAAGCAATTAGGAAAGCATTATCTGGAAGACGGACCATTACTTAGTGTTGAATTTGATACAATTCCTCCAGGGGCATTTGAATGCCAAATTGCTGATGCAGCTAATGAAGGATACTATGCTGCTAATCCTGCTCTTCCAAATTCCCCAGAAGTCTCTGCTGTGAAAAAGCAATCCAATAGCTCTAGATATGATTCATATTTTACCAAATTAAGGTCCCAAGATTCACATATGGAAGGACATGACTTTGGCCCTTTGCATGGTCCTGATTTCCGGGATAAGAAACCCCACAAGAATATAAATCAAAGAGCAACTTTTCACAAGTTTACCAATCATTTGCCTCACAAGAACTCTTCCCTGGATTTGTATCTAGACTCTACTGGGGAAGCATCTGCTTATAATAGTGCTAAAAACCATAGGATGGGCACTAAGCATGGTTTTGAGGGGATGAGGTCAGACTCTCCCTCCAACCCAAGTGACCATTACGAAGAGAATACAGTTGCAGTTAAGCAGATAGATTCACTATTACATCTCTACGATAACATCAACCTGAAGAATGTACAAAAGAATGAATATGTAAAATCTAAGCCTTCAAATTCAGTACATAAGCCTCAAATTTACTTGAATGCTGAAGAAAAAGGGTGTACCAAAAGGATGGCCAAGGAAGAGAAGTTTAATGGCGACAGGAAGTTAAAAAAACAATATCATGATCTTGATGGAATGCGGGTGCTTTCAAATGAAAAGATGGTTGCAAAGCGAGCTAAAGTTAACCCTTTTGAACAATATGATGTTAAACAAGCACCTGTTTATGATCTGGAACCAAGAAAAAATCAAAGGTCTGCTGCAGAGATGCCATCTAGTTTTAGTGAGGATGAAACTGCTGAAACCAGTTCCTCGGTGGATTAA 1575 0.3981 MEEATEMQSEENNFSMEKNKKRRLKTPAQLTALEIFYNDHKYPTEEMKSELAEELELTEKQISGWFCHRRLKDKKLLNDEVGANGRQDRSSGVIQDRGSGLMQDSCGSTKHGDYRYLDPKEVESHGLYNHEFSAADMTYAHRNHHYTENDSATDSTSSESSSSLQERLLPQGQEPYDTEPSSHLMPNGSLPPLNPKGANNMGYKPSGYLKVKGEIEHVAITAVKKQLGKHYLEDGPLLSVEFDTIPPGAFECQIADAANEGYYAANPALPNSPEVSAVKKQSNSSRYDSYFTKLRSQDSHMEGHDFGPLHGPDFRDKKPHKNINQRATFHKFTNHLPHKNSSLDLYLDSTGEASAYNSAKNHRMGTKHGFEGMRSDSPSNPSDHYEENTVAVKQIDSLLHLYDNINLKNVQKNEYVKSKPSNSVHKPQIYLNAEEKGCTKRMAKEEKFNGDRKLKKQYHDLDGMRVLSNEKMVAKRAKVNPFEQYDVKQAPVYDLEPRKNQRSAAEMPSSFSEDETAETSSSVD* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02767 524 MobiDBLite consensus disorder prediction 147 201 - -
Lapu6g02767 524 MobiDBLite consensus disorder prediction 488 524 - -
Lapu6g02767 524 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Lapu6g02767 524 Gene3D - 8 91 - -
Lapu6g02767 524 SUPERFAMILY Homeodomain-like 15 79 IPR009057 -
Lapu6g02767 524 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 524 - -
Lapu6g02767 524 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Lapu6g02767 524 MobiDBLite consensus disorder prediction 503 524 - -
Lapu6g02767 524 SMART HOX_1 18 80 IPR001356 GO:0003677
Lapu6g02767 524 MobiDBLite consensus disorder prediction 84 106 - -
Lapu6g02767 524 MobiDBLite consensus disorder prediction 150 188 - -
Lapu6g02767 524 MobiDBLite consensus disorder prediction 1 23 - -
Lapu6g02767 524 CDD homeodomain 20 75 IPR001356 GO:0003677
Lapu6g02767 524 MobiDBLite consensus disorder prediction 82 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02767 Lapu-Chr6 29304203 29310121 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02767 3 524 Homeobox Transcription Factor Family AT4G03250 38.519 5.54e-79 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lapu6g02767 Homeodomain 3.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02767 - - gmx:100812697 820.846