Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02766 ATGGAAGAAGCAACTGAGATTCAATCAGAAGAAAATAAATTGTCTATGGAGAAAAATAAGAAAAGAAGGCTCAAAACACCTGCCCAGCTTACGGCCTTGGAAAACTTTTATAATGATCACAAATATCCCACCGAGGAAATGAAATCAGAACTTGCTGAAGAGTTAGAGTTGACAGAAAAGCAAATATCTGGGTGGTTTTGCCACAGAAGATTGAAAGATAAAAAGTTGTTGAATGATGAAGTAGGTGCTAATGGACGACAAGATCGTTCAAGTGGTGTTATCCAGGATCGTGGCAGTGGTCTAGTGCAGGATTCATGTGGAAGCACTAAACATGGTGATTATAAGTATTTGGATCCCAAAGAGGTTGAGAGTCATGGCCTCTATAACCATGAGTTTTCGGCTGCAGAGATGACCTATGCACACAGAAACCATCATTATACAGAAAATGATAGTGCAACGGATAACACATCATCTGAGAATAGCTCATCTTTGCAAGATCGATTGCTTCCTCAAGGACAGGATCCATATGATATGGAGCCTTCTAGTCGTTTGATGCCTAACGGGTCTCTTCCGCCCCTAAATCCCAAGGGTGCAAATAACATGGGATATAAACCATCAGGATATTTAAAAGTGAAGGGAGAGATAGAACATGTTGCTATTACTGCTGTCAAAAAGCAATTAGGAAAGCATTATCGGGAAGACGGACCATTGCTTAGTGTTGAATTTGATACAATTCCTCCAGGGGCATTTGAATGCCAAATTGCTGATCTTGCTAATGAAGGATACTATGCTGCAAATCCTGCTCTTCCAAATTCTCCAGAAGTGTCTGCTGTGAAAAAGCAATCCAGTAGCTCTAGATATGATTCATATTTTACCAAATTAAGGTCCCAAGATTCACACATGGAAGGAGGTGACTTTGGCTCTTTGCATGGTCCTGATTTCCAGGATAAGAAACCCCACAAGCATATAAATCAAAGACCAACTTTTCACAGGTTTACCAGTCATTTGCCTCACAAGAACTCTTCCCTGGATTTGTATGCAGACTCTACTGGGGAACCATCTGCTTATAGTAGTGCTAAAAACCATAGGATGGGCACTAAGCATGGTTTTGAGGGGATAAGGTCAGACTCAGCTTCCAACCCGAGTGACCACTATGAAGAGAATACCGTTGCAGTTAAGCAGATAGATTCGCTGTTACATCTCTATGATAACATCAATCTGAAGAATGTACACAAGAATGAATATGTAAAATCTAAGACTTCAAATTCAATACACAAGTCTCAAATTTATTTGAATGCCGAAGAAAAAGGGCTTACCAAAAGGATGGCCAAGGAAGAGAAGTTTAGTGGCGATAGGAAGTTAAAAAAACAATATCATGATCTAGATGGAATGAGGGTGCTTTCAAATGAAAAGATGGTAGCAAAGCGAGCTAAAGTTGACTTAACTGAACAATATGATGTTAAACAAGCACCTGCTTCTGATCTGGAACCAAGAAAAAATCAAAGGTCTGCTGCAGAGATGCCATCTAGTTTTAGTGAGGATGAAACTGCTGAAACCAGTTCCTCGGTGGATTAA 1575 0.4 MEEATEIQSEENKLSMEKNKKRRLKTPAQLTALENFYNDHKYPTEEMKSELAEELELTEKQISGWFCHRRLKDKKLLNDEVGANGRQDRSSGVIQDRGSGLVQDSCGSTKHGDYKYLDPKEVESHGLYNHEFSAAEMTYAHRNHHYTENDSATDNTSSENSSSLQDRLLPQGQDPYDMEPSSRLMPNGSLPPLNPKGANNMGYKPSGYLKVKGEIEHVAITAVKKQLGKHYREDGPLLSVEFDTIPPGAFECQIADLANEGYYAANPALPNSPEVSAVKKQSSSSRYDSYFTKLRSQDSHMEGGDFGSLHGPDFQDKKPHKHINQRPTFHRFTSHLPHKNSSLDLYADSTGEPSAYSSAKNHRMGTKHGFEGIRSDSASNPSDHYEENTVAVKQIDSLLHLYDNINLKNVHKNEYVKSKTSNSIHKSQIYLNAEEKGLTKRMAKEEKFSGDRKLKKQYHDLDGMRVLSNEKMVAKRAKVDLTEQYDVKQAPASDLEPRKNQRSAAEMPSSFSEDETAETSSSVD* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02766 524 SMART HOX_1 18 80 IPR001356 GO:0003677
Lapu6g02766 524 MobiDBLite consensus disorder prediction 82 111 - -
Lapu6g02766 524 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 524 - -
Lapu6g02766 524 MobiDBLite consensus disorder prediction 150 169 - -
Lapu6g02766 524 MobiDBLite consensus disorder prediction 7 24 - -
Lapu6g02766 524 MobiDBLite consensus disorder prediction 147 199 - -
Lapu6g02766 524 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Lapu6g02766 524 Gene3D - 8 91 - -
Lapu6g02766 524 MobiDBLite consensus disorder prediction 503 524 - -
Lapu6g02766 524 SUPERFAMILY Homeodomain-like 16 79 IPR009057 -
Lapu6g02766 524 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Lapu6g02766 524 MobiDBLite consensus disorder prediction 84 106 - -
Lapu6g02766 524 MobiDBLite consensus disorder prediction 1 25 - -
Lapu6g02766 524 CDD homeodomain 20 75 IPR001356 GO:0003677
Lapu6g02766 524 MobiDBLite consensus disorder prediction 478 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02766 Lapu-Chr6 29294618 29300779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02766 3 524 Homeobox Transcription Factor Family AT4G03250 38.734 4.58e-79 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lapu6g02766 Homeodomain 6.4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02766 - - gmx:100812697 860.522