Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02756 ATGAAATGTTGTGATTGCTCTTTCCCTCTCGTAGTGTATTTGGTTTCTTCCATATCCTACTCCTCTAAGCCATTTCTCTCACAAATGGCTACCCTTTGTTCTTTCAGTTTTGTACCCTTTTGCATGCTCTTGTTCCTTGTCTCTCTCACTAGTTCTGCTTATGTTTCTTCACTTTCCTTGAGAAGGCAAGCTTCTATCCTTGTTTCTATGAAGCATGATTTTGGAGTTGCTAACTCTTCTCTCAGAAGCTGGAGCATGTCAAACTACTTGTCCCTTTGCAGTTGGTATGGCATTCAGTGTGGCCATGATAACACGTCTGTGGTGTCACTTGACATATCCGATTTGAACGTTTCAGGGTCAGTTTCACCTGCCATCACAGGACTCTTGAGCCTTGTGAGTGTGTCACTCCAGGGAAATGGCTTCTCTGGGGAGTTTCCAAGTGACATCCACAAGCTACCAAGGCTGAGGTTCCTCAACATATCCATGAACATGTTCAGTGGGAATTTGAGTTGGAAATTCTCCCAGCTTAAGGAGCTTGAAGTGGTGGATGCTTATGACAATGCTTTCAACGGCTCACTTCCTCTGGGTGTCACTGATCTTCCAAATATCAAGCACTTGAACTTTGGAGGCAACTACTTCTCTGGGGAAATCCCTCCACGCTATGGAAACATGTGGCAGCTCAACTTTCTGTCCCTTGCAGGGAATGATTTGAGAGGCTTCATACCAAGTGAGCTTGGGAATCTCACCAACCTGACTCATCTTTACCTGGGATACTACAATCAGTTTGATGGGGGAATTCCTCCTCAGTTTGGTAAGCTGACCAATTTGGTTCATCTAGACATTGCAAACTGTTGCTTGACAGGTCCAATTCCTGTTGAGCTGGGAAACCTCAACAAGTTAGACACTCTGTACTTGCAAACCAATCAGCTAAGTGGTTCGATCCCTCCCCAGCTAGGAAATTTGACTAGATTAAAAGCACTTGATCTATCATTCAACATGCTCACAGGAGGCATCCCTGATGAGTTCTCAGCCCTTCATGAGCTTAACGTCTTGAACTTGTTCATAAACAAGTTGCATGGAGAAATTCCTCACTTCATTTCTGAGCTACCAAACTTGGAGACTCTGATGCTTTGGCAGAACAACTTCACTGGAGTGATTCCTTCAAATCTTGGCCAGAATGGCAGGTTGATTGAGCTTGACTTGTCAACAAATAAGCTCACTGGCTTGGTGCCAAAATCTCTGTGTTTTGGAAAGAGGCTGAAAATTTTGATCCTGCTCAAGAACTTTCTGTTTGGATCTTTGCCTGAGGATCTTGGTCAATGCCACACACTCCAAAGAGTCCGTTTGGGTCAGAACTATTTAACAGGTCCATTGCCACATGAGTTTCTCTATTTGCCTGAACTATTACTTGTGGAGCTACAGAACAATTATCTTAGTGGTAGTTTCCCAAAATCAAGAAACAGCACACCCTCCAAACTAGCACAATTGAACCTATCAAACAACCGCTTCTCAGGGTTTCTTCCAGCCTCAATTTCAAATTTTCCAAACTTGCAAATTCTTCTGCTTAGTGGAAACAGATTTTCTGGAGAAATCCCACCAGATATAGGGAGGTTGAAAAGCATCCTCAAGTTGGATATAAGTATCAACAACTTTTCAGGTACTATTCCACCTGAGATGGGTAATTGTGTCTTACTCACCTATTTAGATTTCAGCCAAAACCAACTATCAGGTCCCATTCCTGTCCAAATTGCTCAAATTCACATATTAAACTACCTTAATGTCTCATGGAACCATCTGAACCAAAGCCTTCCCAAGGAACTTAGGACCATGAAGGGCTTAACTACAGCAGATTTCTCTCACAACAACTTCTCAGGTTCAATACCCGAGGGGGGGCAATTCTCAATCTTTAATTCTACATCCTTTGTGGGTAACCCTCAGCTCTGTGGCTATGACTCCAAGCCATGCAACCTTTCTTCTACAGCTACTTTGGAGTCTCAAGAAAAAAAGAGTGCTAAACCTGGGGTCCCTGGGAAGTTCAAGTTCCTTTTTGCATTGGCATTGTTGGGGTGCTCATTGGTGTTTGCAACCTTGGCCATCATCAAGAGTAGAAAGACAAGGAGGCACTCAAATTCATGGAAGTTAACAGCATTCCAGAAGCTGCAGTATGGGAGTGAGGACATCATAGGGTGCATAAAGGAAAGCAATGTCATAGGAAGAGGTGGATCTGGGGTTGTGTACAGAGGAACTATGCCAAATGGAGAGGAAGTGGCAGTGAAGAAGCTGTTGGGAATCAACAAAGGATCTTCCCATGACAATGGCCTCTCTGCAGAAATAAGAACATTAGGGAGAATCAGACACAGGTACATTGTGAGGTTGCTAGCATTTTGCTCAAACAGAGAGACCAATTTGCTTGTCTATGATTACATGCCAAATGGAAGCTTGGGGGAAGTCTTGCATGGGAAGAGGGGTGAGTTTCTCAAGTGGGACACTAGGCTCAAAATAGCCACAGAAGCTGCAAAAGGACTTTGTTATTTGCACCATGATTGTTCCCCTTTGATAATCCATAGAGATGTCAAGTCAAACAACATACTGCTGAACTCTGATTTTGAGGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTCATGCAAGATAATGGGGCATCAGAGTGCATGTCTTCCATTGCTGGTTCTTATGGCTATATTGCTCCAGAATATGCATACACATTGAAAGTGGATGAGAAAAGTGATGTTTACAGCTTTGGAGTGGTGCTGCTAGAACTCATAACAGGAAGAAGGCCAGTGGGAAATTTTGGAGAAGATGGATTAGACATTGTTCAATGGATCAAGATGCAAACCAATTGGAACAAAGAGATGGTGATGAAGATCCTTGATGAGAGGCTACATCAAATTCCTTTGGCTGAAGCAAAACAAGTGTTTTTTGTGGCAATGTTGTGTGTTCATGAGCACAGTGTGGAGAGACCAACCATGAGGGAAGTGGTTGAAATGCTTGCACAAGCAAAACAACCATATACATTTCAGATGCAGTGA 3048 0.4321 MKCCDCSFPLVVYLVSSISYSSKPFLSQMATLCSFSFVPFCMLLFLVSLTSSAYVSSLSLRRQASILVSMKHDFGVANSSLRSWSMSNYLSLCSWYGIQCGHDNTSVVSLDISDLNVSGSVSPAITGLLSLVSVSLQGNGFSGEFPSDIHKLPRLRFLNISMNMFSGNLSWKFSQLKELEVVDAYDNAFNGSLPLGVTDLPNIKHLNFGGNYFSGEIPPRYGNMWQLNFLSLAGNDLRGFIPSELGNLTNLTHLYLGYYNQFDGGIPPQFGKLTNLVHLDIANCCLTGPIPVELGNLNKLDTLYLQTNQLSGSIPPQLGNLTRLKALDLSFNMLTGGIPDEFSALHELNVLNLFINKLHGEIPHFISELPNLETLMLWQNNFTGVIPSNLGQNGRLIELDLSTNKLTGLVPKSLCFGKRLKILILLKNFLFGSLPEDLGQCHTLQRVRLGQNYLTGPLPHEFLYLPELLLVELQNNYLSGSFPKSRNSTPSKLAQLNLSNNRFSGFLPASISNFPNLQILLLSGNRFSGEIPPDIGRLKSILKLDISINNFSGTIPPEMGNCVLLTYLDFSQNQLSGPIPVQIAQIHILNYLNVSWNHLNQSLPKELRTMKGLTTADFSHNNFSGSIPEGGQFSIFNSTSFVGNPQLCGYDSKPCNLSSTATLESQEKKSAKPGVPGKFKFLFALALLGCSLVFATLAIIKSRKTRRHSNSWKLTAFQKLQYGSEDIIGCIKESNVIGRGGSGVVYRGTMPNGEEVAVKKLLGINKGSSHDNGLSAEIRTLGRIRHRYIVRLLAFCSNRETNLLVYDYMPNGSLGEVLHGKRGEFLKWDTRLKIATEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKFMQDNGASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGNFGEDGLDIVQWIKMQTNWNKEMVMKILDERLHQIPLAEAKQVFFVAMLCVHEHSVERPTMREVVEMLAQAKQPYTFQMQ* 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02756 1015 SUPERFAMILY RNI-like 109 448 - -
Lapu6g02756 1015 FunFam Receptor-like protein kinase 2 218 316 - -
Lapu6g02756 1015 Pfam Protein tyrosine and serine/threonine kinase 733 1003 IPR001245 GO:0004672|GO:0006468
Lapu6g02756 1015 Gene3D Ribonuclease Inhibitor 359 662 IPR032675 -
Lapu6g02756 1015 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 373 659 - -
Lapu6g02756 1015 Gene3D Phosphorylase Kinase; domain 1 700 808 - -
Lapu6g02756 1015 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 226 1005 - -
Lapu6g02756 1015 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 809 1015 - -
Lapu6g02756 1015 Pfam Leucine Rich Repeat 493 514 IPR001611 GO:0005515
Lapu6g02756 1015 Pfam Leucine Rich Repeat 275 297 IPR001611 GO:0005515
Lapu6g02756 1015 Pfam Leucine Rich Repeat 323 345 IPR001611 GO:0005515
Lapu6g02756 1015 SMART serkin_6 731 1011 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02756 1015 ProSiteProfiles Protein kinase domain profile. 731 1011 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02756 1015 SMART LRR_typ_2 369 393 IPR003591 -
Lapu6g02756 1015 SMART LRR_typ_2 297 320 IPR003591 -
Lapu6g02756 1015 SMART LRR_typ_2 514 538 IPR003591 -
Lapu6g02756 1015 SMART LRR_typ_2 321 345 IPR003591 -
Lapu6g02756 1015 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 700 808 - -
Lapu6g02756 1015 SUPERFAMILY L domain-like 395 653 - -
Lapu6g02756 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 853 865 IPR008271 GO:0004672|GO:0006468
Lapu6g02756 1015 ProSitePatterns Protein kinases ATP-binding region signature. 737 760 IPR017441 GO:0005524
Lapu6g02756 1015 SUPERFAMILY Protein kinase-like (PK-like) 725 1004 IPR011009 -
Lapu6g02756 1015 Gene3D Ribonuclease Inhibitor 62 172 IPR032675 -
Lapu6g02756 1015 FunFam Uncharacterized protein 60 217 - -
Lapu6g02756 1015 Pfam Leucine rich repeat N-terminal domain 63 100 IPR013210 -
Lapu6g02756 1015 Gene3D Ribonuclease Inhibitor 261 358 IPR032675 -
Lapu6g02756 1015 Gene3D Ribonuclease Inhibitor 173 260 IPR032675 -
Lapu6g02756 1015 Gene3D Transferase(Phosphotransferase) domain 1 809 1014 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02756 Lapu-Chr6 29135616 29140888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02756 78 1005 Receptor kinase-like Gene Family AT5G65700 57.035 0.0 1066
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu6g02756 PK_Tyr_Ser-Thr 8.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02756 - - gmx:100803075 1769.59