Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02734 ATGTACCATTTTCTGCTTGCTAGATTAACAACTAGGACCCCCCATTTTGCTGTTCTCTGCCACAATCCCATTCTTTTCTTCAATTCACGTGCTTTATCTGTATCAAACACAAATGATCACAAAGGTGGCACCTTTAATGCATTTAGCATCATCAATTCATGTGGGCTGTCCCCTGAAAATGCCCTCAAATTCTCCAAAAGGTTGGAATTGAAAAACCCAGATGGGGCAAATGCTGTTATTGATCTTCTCAGGAACTATGGGTTCTCAGAGACCCAGGTATGTAGCCTTGTAAAGAAACTCCCTTCCGTGCTTTTTTCAAAACCAGACAAGACCCTTTTGCCAAAACTCGAGTTCTTTCGTTCTATTGGGTTTTCAGCCACTGACCTTCCTAGATTGCTCATTGTGAAACCTGCATTTCTGACATTAAGCTTGGAGAAACACATTCGTCCTAGTTATGGGTTAATCAGAAGTCAAGTTCGCAGTGATAAGGAAGTTGTTTCCGCTTTAAAGCATGCTCTGTGGCACTTTAAAAGCATAAATGTGGTGAAGAATTCACTTCCAAACATAGAGGCTTTGAGACAGCTTGGCCTGCCTCAAGGCTCCATTTCTCTCCTGGTAGCCAATTTTCCTAGTGTGACATTTATAAAGCATGCAAGATTTGTTGAGGCTCTGGAGAAAGTGAGGGAAATGGGTTTTGATCCTTTGAAAACAAATTTTGTTATGGCACTTCAAGCTCTTGCAAAGATGAATGAAGCATCATGGAAATCGAAGTTAGAGGTTTTGGAGAAGTGGGGCTGGTCCAGTGATATGTGTCTTTTAGCTTTCAAACAGCATCCCCAGTTTATGGCCTCATCAGAAAACAAGATTATTAAAATAATGAGCTTCTTGATAAAGGATACGGGTTTGGCACCCGAAGAAGTCGCTAGATGCCCTGCACTTCTTAAATGCAACTTGGAGAAGACAGTTATCCCTAGATTTGCAGTTGTTAAAATTTTGAAGAGAAGGGGTTTGGTTAAGGGTGATTTGCAAATAGGTACCTTTATTAAGATCAGTGAGAAAGTGTTTCTGGAGAAATACGTGACTCGATTTCAGAGTTATGAGCCACTACTATTGGCTGCATACAAAGGTCAGAAGTCAAATTGA 1143 0.4077 MYHFLLARLTTRTPHFAVLCHNPILFFNSRALSVSNTNDHKGGTFNAFSIINSCGLSPENALKFSKRLELKNPDGANAVIDLLRNYGFSETQVCSLVKKLPSVLFSKPDKTLLPKLEFFRSIGFSATDLPRLLIVKPAFLTLSLEKHIRPSYGLIRSQVRSDKEVVSALKHALWHFKSINVVKNSLPNIEALRQLGLPQGSISLLVANFPSVTFIKHARFVEALEKVREMGFDPLKTNFVMALQALAKMNEASWKSKLEVLEKWGWSSDMCLLAFKQHPQFMASSENKIIKIMSFLIKDTGLAPEEVARCPALLKCNLEKTVIPRFAVVKILKRRGLVKGDLQIGTFIKISEKVFLEKYVTRFQSYEPLLLAAYKGQKSN* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02734 380 PANTHER CGI-12 PROTEIN-RELATED 49 362 IPR003690 GO:0003690|GO:0006355
Lapu6g02734 380 Pfam mTERF 80 309 IPR003690 GO:0003690|GO:0006355
Lapu6g02734 380 Gene3D Transcription termination factor 3, mitochondrial 161 368 IPR038538 -
Lapu6g02734 380 FunFam Mitochondrial transcription termination factor-like 144 366 - -
Lapu6g02734 380 SMART mt_12 203 233 IPR003690 GO:0003690|GO:0006355
Lapu6g02734 380 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Lapu6g02734 380 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Lapu6g02734 380 SMART mt_12 272 303 IPR003690 GO:0003690|GO:0006355
Lapu6g02734 380 SMART mt_12 304 338 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02734 Lapu-Chr6 28429701 28431525 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lapu6g02734 mTERF 3.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02734 K15032 - gmx:106799612 530.02