Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02731 ATGGTTCGTATTTTTCTGATTCGAACGTTAACTGCATCACTCACAAATCGCAGAAGTACCCAAATTCAATTGGGTTCTCTGCTGCAACACAAACCCAATGCTTTTCTTTTGTATTTCAAGTCCTTCACTTCAAGCACTTCTTTTGATTCTGAATCAGATGGAAATCACCACAAAGATGACACCTTTACCGTGTCTTACCTCATTAACTCATGTGGGGTGTCCCCAAAACTGGCCAGGGAACTCTCGAACAGGGTTAATTTGAAAATCCCAGATGGCCCAAATGCTGTTATTGATCTTCTCTGCACCTATGGGTTCTCCAAATCCCAGCTTGCAAAACTTGTGGAGAATCATCCCACAGTGCTTCTTGCAAGTGCTGAGAATACCCTCTTGCCTAAACTCAAGTTCTTCCGTTCTATTGGGGCTTCCGACACTGACATACCTAAGATCATAATTAATGGCCGTCAATTGTTGTTCAGAAGCTTGGAAAAATTCCTCATTCCAAGTTATGAGGTGCTAAGGAGTGTACTCCGTGACGATGAGGAAGTTGTTAGGTCTTTGAAAAGTGCCGCATTTGGTTTCTCATATAGTGACATGAAAAAAAACTTGGTTCCAAACATTGAGATTTTGAGGCAATGTGGTGTGCCCCAAGCTTCCATCTCTTATCTGTTGATGCATGCTGGGAATCTAGCCTATCGGGAGCATTCCAAATTTGTGGAAGTTGTCAACACTGCTAAGGAATTTGGGCTTAATCCTTTGAAAAGAAATTTTATTGTGGGTGTTGAAGTGCTTACTAAGAGCAAAGCGGTGTGGGAATCAAGGTTTGAGATGTATGAGAGGTGGGGATGGGACCGCGAAATGGTTCTTGAAGTATTTCGAAAGTTTCCCGGTGTTGTAAAGTTGTCAGAGGAGACGTTTACCAAAAAAATGAATTTCCTTGTGAAGGAGATGGGTTGTCCATCAGAAGCTATTGCTGAATATCCTGTGGTTGTAGGATACAGCTTGGAGAAGAGGATTATCCCTAGATTTTCAGTTATCAAAATCTTGAAATCAAAGGGTCTGCTTGAGAATAATTTTCCCTTTAGTTCCTTTGTTTGTATAACTGAGAAAACTTTTTTGGAGAGATTTGTTGTCAATTTTCAGAAAGATTTGCCTACAGTGCTAGATGTCTACAACAGTTTGATCAATCAACAGAATGTAATATAG 1203 0.4057 MVRIFLIRTLTASLTNRRSTQIQLGSLLQHKPNAFLLYFKSFTSSTSFDSESDGNHHKDDTFTVSYLINSCGVSPKLARELSNRVNLKIPDGPNAVIDLLCTYGFSKSQLAKLVENHPTVLLASAENTLLPKLKFFRSIGASDTDIPKIIINGRQLLFRSLEKFLIPSYEVLRSVLRDDEEVVRSLKSAAFGFSYSDMKKNLVPNIEILRQCGVPQASISYLLMHAGNLAYREHSKFVEVVNTAKEFGLNPLKRNFIVGVEVLTKSKAVWESRFEMYERWGWDREMVLEVFRKFPGVVKLSEETFTKKMNFLVKEMGCPSEAIAEYPVVVGYSLEKRIIPRFSVIKILKSKGLLENNFPFSSFVCITEKTFLERFVVNFQKDLPTVLDVYNSLINQQNVI* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02731 400 FunFam Mitochondrial transcription termination factor-like 161 383 - -
Lapu6g02731 400 Gene3D Transcription termination factor 3, mitochondrial 178 383 IPR038538 -
Lapu6g02731 400 PANTHER CGI-12 PROTEIN-RELATED 61 377 IPR003690 GO:0003690|GO:0006355
Lapu6g02731 400 SMART mt_12 147 178 IPR003690 GO:0003690|GO:0006355
Lapu6g02731 400 SMART mt_12 111 142 IPR003690 GO:0003690|GO:0006355
Lapu6g02731 400 SMART mt_12 288 319 IPR003690 GO:0003690|GO:0006355
Lapu6g02731 400 SMART mt_12 183 215 IPR003690 GO:0003690|GO:0006355
Lapu6g02731 400 SMART mt_12 320 354 IPR003690 GO:0003690|GO:0006355
Lapu6g02731 400 Pfam mTERF 97 250 IPR003690 GO:0003690|GO:0006355
Lapu6g02731 400 Pfam mTERF 261 372 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02731 Lapu-Chr6 28375327 28378488 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lapu6g02731 mTERF 2.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02731 K15032 - gmx:102670177 536.569