Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02726 AATGAAGAGGTGGTGGCAGCAGTGTTGCCAATGCAGGAACATTGGCTTCCACTCTCAAACCTTGACCTGCTTCTACCTCCAGTGGATGTAGGAGTTTTCCTTTGCTACAAGAACCCTATTCTCACCACATCCACAGCCATGCCCAACCATATCACCTTTGCATCCATGGTGGCCTCTCTCAAAAAGGCCTTGGCACAAACCCTAATCTCTTATTATGTCTTTGCAGGTGAAGTCGTGCTCAGCAACATGGGTGAACCCGAACTTCTTTGTAACAATCGTGGGGTTGATTTCGTTGAAGCTCAGGCTGATGTTCAACTAAACAACCTTGACTTTTACAACCCTGATCAAACTATTGAAGGCAAGTTTATCCCAAAAAAGAAAAATGGTGTGCTTGCTGTCCAGGCAACTGCATTGAAGTGTGGAGGAATAATAGTGGCATCCACATTTGATCATCGCATAGCGGATGCATATTCAGCAAACATGTTTCTTGTTTCATGGGCTGACATGGCCCACCGCACCACCTCCAACGCTACCACTATGCTCGCCGCCACTTCCTGTCACCCA 564 0.4699 NEEVVAAVLPMQEHWLPLSNLDLLLPPVDVGVFLCYKNPILTTSTAMPNHITFASMVASLKKALAQTLISYYVFAGEVVLSNMGEPELLCNNRGVDFVEAQADVQLNNLDFYNPDQTIEGKFIPKKKNGVLAVQATALKCGGIIVASTFDHRIADAYSANMFLVSWADMAHRTTSNATTMLAATSCHP 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02726 188 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 174 - -
Lapu6g02726 188 Pfam Transferase family 2 179 - -
Lapu6g02726 188 Gene3D - 1 187 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02726 Lapu-Chr6 28258525 28270993 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02726 60 171 Monolignol Biosynthesis Gene Families AT5G48930 29.412 2.85e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02726 - - vum:124819812 284.648