Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02725 ATGTGTGCTGAAAACAGAGATTTTTCAGTGCATGTGAGGAATGAAGAGGTGGTGGCAGCAGTGTTGCCAATGCAGGAACATTGGCTTCCACTCTCAAACCTTGACCTGCTTCTACCTCCAGTGGATGTAGGAGTTTTCCTTTGCTACAAGAACCCTATTCTCACCACATCCACAGCCATGCCCAACCATATCACCTTTGCATCCATGGTGGCCTCTCTCAAAAAGGCCTTGGCACAAACCCTAATCTCTTATTATGTCTTTGCAGGTGAAGTCGTGCTCAACAACATGGGTGAACCCGAAATTCTTTGTAACAATCGTGGGGTTGATTTTGTTGAAGCTGAAGCAGATGTTGAACTAAACAACCTTAACTTTTACAACCCCGATCAAACTATTGAAGGCAAGTTTGTCCCAAAAAAGAAAAATGGTGTGCTTGTTGTTCAGTGTGGAGGAATAATAGTGGCATGCACATTTGATCATCGCATAGCAGATGCATATTCAGCAAACATGTTTCTTGTTTCATGGGCTGCCATGGCCCACCCCACCACCTCCAACCCTACCACCATTCTCGCCGCCACTTCCTGTCACCCATGCTTTCGTCGCTCACTCCTCAGCCCTCGCCGTCCAGGTTCCATTCACCCTTCTCTACACCGCATCTACACTTCCATCTCCGACCTCCCTCCCCCTCCCACCATCTCCGCCACCTCTCTCCTCAGCCGCATATACTACGTAACGGTGGATCAGCTCCACCACATGCAGTCCCTCGCCGCCACGCGCACAAAGCTCGAGTGTTTCTCCGCGTTCTTATGGAAGATGGTTGCACGTGCAGCTTCAAGAGACACAAATGGTAAAAGGGTTATGGCCAAAATGGGCATTGTGGTTGATGGAAGGAAGAGACTAGGCAATGGTGACAAAGAGAGCGAAACAATGATGGAGTGTTACTTTGGGAACGTGCTTTCCATACCCTTTGGAGAGAAACTGGTGGAGGAGTTGGTGAAGGAGCCGTTAGGGTTTGTTGTGGAAGCTGTTCACGAGTTTTTAACGGCGGCCGCCACAGAGGAGCACTTCTTAGGACTGATTGATTGGGTGGAGGCTCAGAGGCCGATCCCTGGAGTTGCAAGAATTTATTGTAATCGTGCCAATGAGGGACCAGCCTTTGTGGTGTCGTCCGGTCAGAGGTTCCCGGGGGAGAAGGTGGATTTTGGGTGGGGGAAGGTTGTGTTTGCATCGTACCATTTTCCTTGGGGTGGTGAAGCTGGTTACGTTATGCCAATGCCAAGTCCTTTGGGGAATGGTGATTGGATTGTGTACATGCACCTTCCAAAGAAGCAGTTGGAGATGATAGAGAGTGAAGCTGCTCATGTGTTTAAGCCTTTAACTTGGGACTACCTTAACCAGTAA 1398 0.4914 MCAENRDFSVHVRNEEVVAAVLPMQEHWLPLSNLDLLLPPVDVGVFLCYKNPILTTSTAMPNHITFASMVASLKKALAQTLISYYVFAGEVVLNNMGEPEILCNNRGVDFVEAEADVELNNLNFYNPDQTIEGKFVPKKKNGVLVVQCGGIIVACTFDHRIADAYSANMFLVSWAAMAHPTTSNPTTILAATSCHPCFRRSLLSPRRPGSIHPSLHRIYTSISDLPPPPTISATSLLSRIYYVTVDQLHHMQSLAATRTKLECFSAFLWKMVARAASRDTNGKRVMAKMGIVVDGRKRLGNGDKESETMMECYFGNVLSIPFGEKLVEELVKEPLGFVVEAVHEFLTAAATEEHFLGLIDWVEAQRPIPGVARIYCNRANEGPAFVVSSGQRFPGEKVDFGWGKVVFASYHFPWGGEAGYVMPMPSPLGNGDWIVYMHLPKKQLEMIESEAAHVFKPLTWDYLNQ* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02725 465 Gene3D - 222 450 IPR023213 -
Lapu6g02725 465 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 22 426 - -
Lapu6g02725 465 Pfam Transferase family 9 453 - -
Lapu6g02725 465 Gene3D - 7 220 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02725 Lapu-Chr6 28249824 28254601 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02725 10 448 Monolignol Biosynthesis Gene Families AT5G48930 23.491 1.68e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02725 - - gmx:100785067 740.725