Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02700 ATGGTGCCCCCTTTTCTCATTAGAAGATTATTTACATCCTTCACACACTGCAGAAACACCCACTTCCAATTCGGTTCTCTGTTGCAACACAGACACAATGCTTTTCTTTTTAAGTTCAACACATTCACTTCTGGTGGGAACAGCCACAAAGGTGACACCTTTACCGTGTCTTACCTCATCAACTCATGTGGGTTCTCTCTGGAATTGGCCAGGGAACTCTCCAAGAGGGTGAAGTTGAAAACCCCAGATGGTCCAAATGCTGTTCTTGACACTCTCAAGAACTATGGATTTTCCAAAACTCAGGTTGCAAAACTCCTCGAGAAGAATCCCTGGTTGCTTGCTGCAAAGGTAGAGGCAACCCTCTTGCCCAAACTCAAGTTCTTCCGCTCTATCGGGGTTTCCAACGCTGACATGTCTAAGATCGCTCTTGAAAACCCCTCTCTCTTGCGGAGGAGTCTGGGAAAATGCCTTCTGCCACGATACGAGATTATCAGGCGTATAGTTTGTGATGATCGGGAAGTTGTTAGAGTTTTAAGAAAAGCCCCACGTAATTTCACATATTGTGACCTAAGAAATTGCTTGGTTCCAAACATTGAGGTTTTGAGGCGGTCTGGTGTGCCTCAGGGCTCAATCTCTCTGCTGGTGGTCAACTTCCCCTCTGCAGCAATGCGAAAGCATTCCAGATTTGTGGAAGTTGTCGGGAGAATTAAGAAATTTGGGTTTGATCCTAAGAGAACAACTTTTGTTATGGCTATCCAAGTGCTTATGACGATGCGTAAAGGGGCATGGGAATCGAGATTTGAGATTTATGAGAGGTGGGGCTGGAACTGGGAAATAGTTCTTCAAGCGTTTCTGAAGTTTCCCAGTTTTATGAAGTTGTCCGAGAAGACAGTTACGAAGAAAATGACTTTCCTAGTGAAGGAGGTGGGTTTGCAATCGTTAGATATTGCCGCATATCCTCCTCTTCTAAGCTACAACCTGGAGAAGAGGATTATCCCTAGATTCTCAGTAATTAAAATCTTGAAATCAAAAGGTTTTCTTAAGAGTAATTTTAGTATTAGTTCCTATATGTGCTTTACGGAGGAAATTTTTTTGAAGAAATTTGTCAATAGTTTCCAGGAAGATTTGCCTATCTTACTAGATGTCTACAAAGGATTGATTCATCATGAGAATGTAATGTAG 1182 0.4247 MVPPFLIRRLFTSFTHCRNTHFQFGSLLQHRHNAFLFKFNTFTSGGNSHKGDTFTVSYLINSCGFSLELARELSKRVKLKTPDGPNAVLDTLKNYGFSKTQVAKLLEKNPWLLAAKVEATLLPKLKFFRSIGVSNADMSKIALENPSLLRRSLGKCLLPRYEIIRRIVCDDREVVRVLRKAPRNFTYCDLRNCLVPNIEVLRRSGVPQGSISLLVVNFPSAAMRKHSRFVEVVGRIKKFGFDPKRTTFVMAIQVLMTMRKGAWESRFEIYERWGWNWEIVLQAFLKFPSFMKLSEKTVTKKMTFLVKEVGLQSLDIAAYPPLLSYNLEKRIIPRFSVIKILKSKGFLKSNFSISSYMCFTEEIFLKKFVNSFQEDLPILLDVYKGLIHHENVM* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02700 393 PANTHER CGI-12 PROTEIN-RELATED 53 371 IPR003690 GO:0003690|GO:0006355
Lapu6g02700 393 Pfam mTERF 89 312 IPR003690 GO:0003690|GO:0006355
Lapu6g02700 393 Pfam mTERF 295 364 IPR003690 GO:0003690|GO:0006355
Lapu6g02700 393 Gene3D Transcription termination factor 3, mitochondrial 162 377 IPR038538 -
Lapu6g02700 393 FunFam Mitochondrial transcription termination factor-like 153 376 - -
Lapu6g02700 393 SMART mt_12 313 347 IPR003690 GO:0003690|GO:0006355
Lapu6g02700 393 SMART mt_12 139 170 IPR003690 GO:0003690|GO:0006355
Lapu6g02700 393 SMART mt_12 281 312 IPR003690 GO:0003690|GO:0006355
Lapu6g02700 393 SMART mt_12 103 134 IPR003690 GO:0003690|GO:0006355
Lapu6g02700 393 SMART mt_12 175 207 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02700 Lapu-Chr6 27682197 27684294 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lapu6g02700 mTERF 4.2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02700 K15032 - gmx:100813396 524.242