Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02695 ATGAACGATGATGGAAATTTTCAACTACTAGATCAAAATTTTGTTTCATTATGGGAGAGTTTCACTCATCCAACTGACACATTGGTACCTACTCAAGTAATGGAGTTAGGAGGAGAACTCTCTTCTCGACAAGGAGAGTTCAACTTCTCAAGTGGAAGGTTCAGACTTCATCTACAGCGGGATGGGAATCTTGTGCTCAAGCTTATAAATTTGCTTAGCAACGATAGTTATGAGCCTTACTTTGATACGGGCACTGCTGATGCAAAGAACCAAACAAATGTTGGAATGAGATTTGTATTTGATAAATCGGGCTACTTGTACGTACTGAAGAAAAGTGGGGAACAGTTTAAAGTCAGCATATGGAACGAGACAATCTCTTCTAATGACTTCTACTACAAAGCAACAATCAATTATGATGGAGTTTTGACTGTATCATATTACCCCAAAGATCCAAAAAAAGAACAAAGGTGGGCCACTTTAAAGACAATACCAGAGAATATTTGTCTAGATTCTAATTTCACAAATGGTGGAGGAGTTTGTGGGTTTAATAGCATATGCAACCTGAAAGATGACCAGAGGCCTATGTGTAACTGCCCAGAGAAATATTCTCTAATTGATACAAATAACATGTATGGTGGTTGCATACCAAATTTCCAAGGCTTTTGTCAAGGAGTTGGTGTCATGGGTTCACGAGATTATTACATAATGAAAGAGTTGCAAAACACTGATTGGCCAGAATCTGATTATGAAACACTAAGTCCTTGTACTCTAAAAGAATGTAAAAACTCTTGTTTGCAAGATTGCTTATGTGGTTTGGTTACTTTTGATGGAAATTCTTGCTGGAAGAAGAAACTACCTCTCACAAATGGGAGAAGTGGCAAAGAAGTAAATAGAACTTCTATTATAAAATTGATGAAAAATAATGAACCCTTGATTCCTTTCCCGAAGCAAAAAAAAGATCATGATACCTTGTTTGTTGTGATATCAGTTCTTTTGGGCTTCTCTGTGTTGGTCATTTCAATGTTGGTTGGTGCAATATATTTTGGTTTCTCCAACAACCGCAAGAAGATCAAAAGTAGTAAAACCAACAATGGTGTTGCTGAAAAAAACTTGCGTAACTTCACCTTCAAGGAACTTGTAGAAGCAACAGGAAACTTTAGTGAAGAATTGGGAAGGGGATCTTTTAGCATTGTCTACAAAGGAACAATAGAGATGACTAGTGTGGCTGTTAAGAAATTAAACAAGTTATTTCAAGACAATGACAAGGAATTTCAGACTGAAGTGAATGTAATAGGTCAAACTCATCACAGGAATCTAGTTCGTCTACTTGGATATTGTAATGAAGGACAACACCGAATTTTGGTATATGAGTTTATGAGCAATGGCACTTTAGCAAGCTTCCTTTTCACCCCTTTGAAAGCAAGTTGGAGACAAAGATTTGACATTGCCTCTGGGATTGCAAAAGGTCTTGTTTACTTGCATGAGGAATGTTGCACCCAAATCATCCACTGTGACATAAAGCCACAAAATATACTTCTAGATGATCAATATAATGCTAGAATTTCAGATTTTGGATTAGCAAAGCTATTACTGATCAATCAAAGCCACACTGAAACTGGAATTAGAGGAACAAAAGGGTATGTTGCACCAGATTGGTTTAGAAGTTCACCAATCACTGCTAAGGTTGACACTTATAGTTTTGGTGTGTTGTTATTGGAGATAATCTGTTGCAGGAGAAATGTAGAAAAGGAGCTTGTTGATGAAGAGAAAGGGATATTGACAGATTGGGCATATGATTGCTACAAGATTGGAAGAGTAGACATTCTTCTAGAAAATGATGATGAAGCTATTGATAACATTAAGAGTTTTGAAAAAATTTTAATGATTGCTCTTTGGTGCATTCATGAAGATCCCTCTCTTAGGCCAACAATGAAGAAGGTTTTGCTAATGCTGGAAGAAATTGTTGAAGTTTCAATACCCCCAAATCCCTACCTTTATAGTTCTGCTAGTTAA 2013 0.3666 MNDDGNFQLLDQNFVSLWESFTHPTDTLVPTQVMELGGELSSRQGEFNFSSGRFRLHLQRDGNLVLKLINLLSNDSYEPYFDTGTADAKNQTNVGMRFVFDKSGYLYVLKKSGEQFKVSIWNETISSNDFYYKATINYDGVLTVSYYPKDPKKEQRWATLKTIPENICLDSNFTNGGGVCGFNSICNLKDDQRPMCNCPEKYSLIDTNNMYGGCIPNFQGFCQGVGVMGSRDYYIMKELQNTDWPESDYETLSPCTLKECKNSCLQDCLCGLVTFDGNSCWKKKLPLTNGRSGKEVNRTSIIKLMKNNEPLIPFPKQKKDHDTLFVVISVLLGFSVLVISMLVGAIYFGFSNNRKKIKSSKTNNGVAEKNLRNFTFKELVEATGNFSEELGRGSFSIVYKGTIEMTSVAVKKLNKLFQDNDKEFQTEVNVIGQTHHRNLVRLLGYCNEGQHRILVYEFMSNGTLASFLFTPLKASWRQRFDIASGIAKGLVYLHEECCTQIIHCDIKPQNILLDDQYNARISDFGLAKLLLINQSHTETGIRGTKGYVAPDWFRSSPITAKVDTYSFGVLLLEIICCRRNVEKELVDEEKGILTDWAYDCYKIGRVDILLENDDEAIDNIKSFEKILMIALWCIHEDPSLRPTMKKVLLMLEEIVEVSIPPNPYLYSSAS* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02695 670 ProSitePatterns Protein kinases ATP-binding region signature. 390 412 IPR017441 GO:0005524
Lapu6g02695 670 ProSiteProfiles Protein kinase domain profile. 384 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02695 670 SUPERFAMILY Protein kinase-like (PK-like) 367 652 IPR011009 -
Lapu6g02695 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 501 513 IPR008271 GO:0004672|GO:0006468
Lapu6g02695 670 SUPERFAMILY alpha-D-mannose-specific plant lectins 1 85 IPR036426 -
Lapu6g02695 670 Gene3D Phosphorylase Kinase; domain 1 365 458 - -
Lapu6g02695 670 FunFam Serine/threonine-protein kinase 25 171 - -
Lapu6g02695 670 FunFam S-receptor-like serine/threonine-protein kinase 352 458 - -
Lapu6g02695 670 SUPERFAMILY alpha-D-mannose-specific plant lectins 49 145 IPR036426 -
Lapu6g02695 670 CDD STKc_IRAK 390 654 - -
Lapu6g02695 670 Gene3D Transferase(Phosphotransferase) domain 1 459 659 - -
Lapu6g02695 670 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 459 659 - -
Lapu6g02695 670 Pfam Protein kinase domain 387 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02695 670 SMART serkin_6 384 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02695 670 Gene3D - 25 163 IPR036426 -
Lapu6g02695 670 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02695 Lapu-Chr6 27554770 27558383 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02695 366 652 Receptor kinase-like Gene Family AT1G60800 41.892 1.28e-68 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lapu6g02695 Pkinase 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02695 - - gmx:100796619 1120.92