Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02691 ATGGTGTTAATGACAGGTTATGGAATGATTGAGTCAACTGTTGTAGGAACATGTGGCTTTGATATGGAAAAGTTTCGCAATTATTCATCAATAGGGTTATTGACTCCAAACATGGAGGAAAAAGTGGTAGACTGGAATACTAATGCATTTATGCCCTCTGGCAGCATTGGTGATCTTTGGTTGAGAGGACCTTCGATTATGACAGGGTACTTGAATAATGAGGAAGCTACAATATCAACAATTGATATAGATGATTGGCTTCATACTAGAGATCTTGTTTATTTTGATCATGATGGGTACTTACACATAGCTGACCAATTGAAACATATCATCAAATATGAGGGCTTTCAAATTGCTCTTGCAGATTTAGAAATTGTTAATTTTGCACCCTGA 393 0.3639 MVLMTGYGMIESTVVGTCGFDMEKFRNYSSIGLLTPNMEEKVVDWNTNAFMPSGSIGDLWLRGPSIMTGYLNNEEATISTIDIDDWLHTRDLVYFDHDGYLHIADQLKHIIKYEGFQIALADLEIVNFAP* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02691 130 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 6 124 - -
Lapu6g02691 130 Pfam AMP-binding enzyme 3 113 IPR000873 -
Lapu6g02691 130 Gene3D - 1 109 IPR042099 -
Lapu6g02691 130 SUPERFAMILY Acetyl-CoA synthetase-like 3 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02691 Lapu-Chr6 27507031 27507527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02691 3 126 Monolignol Biosynthesis Gene Families AT4G19010 60.484 5.96e-51 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02691 K01904 - gmx:100804808 199.134