Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02686 ATGACGGAACTGAGTCAACTCGGCGATCGTGGTGCACTGGATGCATCATTGCTTGATCTAAGCCACGCCGGGAGCTTCCTGGCGCGATTCGCGGAGGCCCCGCATTATTACAGCGCGTTGTTCAACGCGCTTGGGGATGGTTTGGGTGCGGACAGCCTGGAGAGGCACACGGTGGAGCAGCAGCTCTTGGGCTGGGAGATCAGGAACATGGTGGTCGTGGGCGGGCCGAAGAGGACCGAAGAGGTTAAGGTGGAGTGGTGGGCGGATTCCGGTGATTTATTGGACGAGGTTCGACTGCAGATTCGTGTGATTTTGTTTGGCATCATGTCGATGGGTGAGCGGAAGACTATCGACCTCGAACAGGGATGGGGTTTCATGCAGAAGGGCATCACCAAACTCAAGAACATTCTGGAAGGCCTACCCGACCCTCAAGAATGA 438 0.5639 MTELSQLGDRGALDASLLDLSHAGSFLARFAEAPHYYSALFNALGDGLGADSLERHTVEQQLLGWEIRNMVVVGGPKRTEEVKVEWWADSGDLLDEVRLQIRVILFGIMSMGERKTIDLEQGWGFMQKGITKLKNILEGLPDPQE* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02686 145 Pfam GRAS domain family 23 87 IPR005202 -
Lapu6g02686 145 ProSiteProfiles GRAS family profile. 1 145 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02686 Lapu-Chr6 27443979 27444498 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02686 19 87 GRAS Transcription Factor Family AT3G54220 68.116 2.23e-25 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu6g02686 GRAS 6.5e-14 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02686 - - pvu:PHAVU_011G024600g 125.946