Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02684 ATGACGGAACTGAGTCAACTCGGCGATCGTGGTGCACTGGATGCATCATTGCTTGATCTAAGCCACGCCGGGAGCTTCCTGGCGCGATTCGCGGAGGCCCGCAGTTATTACAGCGCGTTGTTCAACGCGCTTGGGGATGGTTTGGGTGCGGACAACCTGGAGAGGCACACCGTGGAGCAGCAGCTCTTGGGCTGGGAGATCAGGAACATGGTGGTCGTGGGCGGGCCGAAGAGGACCGAAGAGGTTAAGGTGGAGTGGTGGGCGGATTCCGGTGATTTATTGGACGAGGTTCGACTGCAGATTCGTGTGATTTTGTTTGGCATCATGTCGATGGGTGAGCGGAAGACTATCGACCTCGAACAGGGATGGGGTTTCATGCAGAAGGGCATCACCAAACTCAAGAACATTCTGGAAGGCCTACCCGACCCTCAAGAATGA 438 0.5616 MTELSQLGDRGALDASLLDLSHAGSFLARFAEARSYYSALFNALGDGLGADNLERHTVEQQLLGWEIRNMVVVGGPKRTEEVKVEWWADSGDLLDEVRLQIRVILFGIMSMGERKTIDLEQGWGFMQKGITKLKNILEGLPDPQE* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02684 145 Pfam GRAS domain family 23 87 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02684 Lapu-Chr6 27431457 27431976 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02684 19 87 GRAS Transcription Factor Family AT3G54220 65.217 5.41e-24 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu6g02684 GRAS 2.3e-13 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02684 - - pvu:PHAVU_011G024600g 121.709