Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02666 ATGAAAACCACGGCTATATATAACATAGAAATCACACTCGGAAAGGATGGACAATTAGCTAGAGCAGCTGGTGCTGTAGCGAAACTAATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAACTGCTCGGCAACAGTTGGACAAGTGGGAAATGTTGGGGTAAACCAGAAAAATTTAGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAACGTCCTATAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCGCATGGGGGTGGTGAAGGGAGGACCCTAATTGGTAGAAAAAAACCCGCAACTCTTTGA 345 0.4406 MKTTAIYNIEITLGKDGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKNLGRAGSKCWLGKRPIVRGVVMNPVDHPHGGGEGRTLIGRKKPATL* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02666 114 MobiDBLite consensus disorder prediction 90 114 - -
Lapu6g02666 114 ProSitePatterns Ribosomal protein L2 signature. 83 94 IPR022671 GO:0003735|GO:0005840|GO:0006412
Lapu6g02666 114 Pfam Ribosomal Proteins L2, C-terminal domain 3 113 IPR022669 GO:0003735|GO:0005840|GO:0006412
Lapu6g02666 114 SMART Ribosomal_L2_C_2 4 114 IPR022669 GO:0003735|GO:0005840|GO:0006412
Lapu6g02666 114 FunFam 50S ribosomal protein L2 61 114 - -
Lapu6g02666 114 SUPERFAMILY Translation proteins SH3-like domain 4 109 IPR008991 -
Lapu6g02666 114 PANTHER RIBOSOMAL PROTEIN L2 4 110 IPR002171 GO:0003735|GO:0005840|GO:0006412
Lapu6g02666 114 Gene3D Ribosomal protein L2, domain 3 62 114 IPR014726 -
Lapu6g02666 114 Gene3D - 1 61 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02666 Lapu-Chr6 27085150 27085767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02666 6 105 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 42.342 3.92e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02666 K02886 - gmx:3989337 203.756