Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02661 AGCACAGAAATGGTAACCCTAGTTGCTTCTTATTGTGTCCTTCCACGCCTAGAAACACCCAAAGGTCATTTGTGGTTAGCAGACAGTGACCAGGTTGTGTGTTTAAGTCACACACCCACAATCTATGTTTACGAAGCAAAACACAATGATGACACCATTGAGAGGTTGAGGAACTCACTTGGTGAGATTTTAGTGCACTACTATCCAGTGGCTGGCAGATTGAGCTTAGCAGAAAGTGGTCGAATTGAAGTGGATTGCAATGCCAAGGGAGTGACATTGCTTGAAGCTGAAACCACAAAATCTTTGGGTGATTATGGAGACTTTTCACCTTCTGAGTCTGTCAAGGAACTTGTTCCAAACATTGATTACACTCAGCCCAAAGAGGAAATTCCTTTGATGCTTGTGCAATTGACAAGATTCCATGGTGGGGAAGGCTTTGTCATTGGAGTAGCTCTGTCTCACTTTTTGACTGATGGGCTTGGTGGCATTCTATTCATCAATTCATGGGCAAAACTGGCTCGTGGAGAGACACTGGAGCCTCATGAAGAGCCATTTCTTGATAGAACAATACTCAAACTCCAACACTCATCAACATCACCACGCTTTGATCACCCGGAGTTGAAGCCTCTACCATTTAAACTAGGAAGTTCTGACAGCGTTGATGAGGAAAACAAGAAAACAATTTCTGTGTTACTGAAACTAACCCAAGAGCAAGTGGAGAAGCTGAAGAAGCAGGCGAATAACCAACCCTTGAAAGGGGTACGAGGTTATAGCAGATTTGAAGCCATTGCTGCTCATATATGGAGATGTGCATCTAAGGCTCGTGAGCTTGAAGAGAAGCAACCAACCGTAGTTCGGTTCAATGCTGATATCCGCAGCAGACTAATTCCTCCTCTTCCAAGGAATTACTTTGGGAATGCTTTGGCAGCAACAGTGGCACCCAGATGCTATGTCGGAGAAATTGTGTCAAAGCCTTTGAGCTATGCTGCGCAAAAGGTAAGAGAAGCCATTGAAAAGCTTACAAATGAGTACATAAGATCACAAATGGAGAATGTGTTTGGTGAGGAGCAATTGAAATGCATAAGGGGTTTGTTCTCGGGAGAAGGAGAGCGTAGGAATGTCCCTTTTGCAGGGAATCCGAATCTTCAAATCACAAGCTGGATGAGCATGCCAGTTTATGAAGCAGATTTTGGGTGGGGAAAGCCTGTGTATTTTGGGTTGGCCTCTGTGTCTCCTCCACAAGATAGGGCATTGATTCTTCTAAGTCCTCATGGTGATGGATCCGTAATCGTGTTGATGCACTTCCAAGTAGCACATTTGGAGCTTTTCAAAAAACACTTCTACCACTTTGTATGA 1356 0.4403 STEMVTLVASYCVLPRLETPKGHLWLADSDQVVCLSHTPTIYVYEAKHNDDTIERLRNSLGEILVHYYPVAGRLSLAESGRIEVDCNAKGVTLLEAETTKSLGDYGDFSPSESVKELVPNIDYTQPKEEIPLMLVQLTRFHGGEGFVIGVALSHFLTDGLGGILFINSWAKLARGETLEPHEEPFLDRTILKLQHSSTSPRFDHPELKPLPFKLGSSDSVDEENKKTISVLLKLTQEQVEKLKKQANNQPLKGVRGYSRFEAIAAHIWRCASKARELEEKQPTVVRFNADIRSRLIPPLPRNYFGNALAATVAPRCYVGEIVSKPLSYAAQKVREAIEKLTNEYIRSQMENVFGEEQLKCIRGLFSGEGERRNVPFAGNPNLQITSWMSMPVYEADFGWGKPVYFGLASVSPPQDRALILLSPHGDGSVIVLMHFQVAHLELFKKHFYHFV* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02661 451 Gene3D - 4 209 IPR023213 -
Lapu6g02661 451 Coils Coil 330 350 - -
Lapu6g02661 451 Gene3D - 216 450 IPR023213 -
Lapu6g02661 451 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 445 - -
Lapu6g02661 451 Pfam Transferase family 4 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02661 Lapu-Chr6 27010218 27011785 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02661 5 448 Monolignol Biosynthesis Gene Families AT5G48930 34.452 1.98e-91 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02661 K13065 - gmx:100779814 722.235