Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02660 ATGGTAACCATCGTGGGTTCATACAATGTCACTCCAAATCAACCAACTCCTAGTGAACCTTTGTGGCTATCAGATAGTGACCAAATCGGGTTCCTAGGTCACGTACCCAATATCTTCATCTACAAAGCAAAACACACTGGCAACCCCATTGAGAGGATGAGGAACTCTCTGAGCAAGACTTTAGTTCACTACTATCCAGTTGCTGGCAGATTGAGATTAACAAAAGATGATCGGATGGAAGTGGATTGCAACGCTAAGGGAGTCATGTTGCTTGATGCCGAAAGCACAAAATCATTTGATGATTATGGAGACTTTTCACCCTCTGAATCAACGGAGGAACTTGTTCCAAAAGTTGATTACACTCAGCCTATAGAGGAGATTCCCCTACTGCTATTTCAGGTAACAAGGTTCCATGGTGGTGAAGGACTTGCCCTTGGAGTTGTTATCTCTCACCCTGTCACTGATGCGACCGGCATCATCCACTTGGTGAACAATTGGGCAAAGGTGGCTCGAGGAGAAGAACTACAGCCTAATGAAATTCCATTTCTCGATCGAACAGGGCTCAAATTACCACACCAACACTCATCACCGAGTGTTAAACTCCCAGAATGGAAGCCAGTGCCACAGACACCACAAATAGAGCAAAAGAAGAGAAGTGCTTCATTGTTGAAACTCACATCAAGCCAGGTAGAGGCGCTAAAGAAGAAGGCCAATGAAAAACCTTCAAAAGTAGGGGTAAGACCCTATACCAGATTTGAAGCTGTTGCTGCTCATATATGGAGATGTGCAGCCAAGGCTCGTGAATCTGGTGAGAACCACCCAACTTTTGTTCGGTTTAGTGTTAATTTTCGTAGTAGATTGAATCCACCTCTCCCTCAGAACTATTTTGGGAATGCTTTGGCCAAAGGAGTGACACCAAAATGTTATGAGGGAGATATCATATCGAACCCTTTAGGTTTTTCTGCTGAAAAGATAAGGGAAGCAACTCATGCGGTTACAGATGAGTTTATATGGTCTCAATTAAAGGCTAGTTTAGGGCAAGGGCAACAGGATCACATAAGGGCATTTTTCAAGGGACAAGGACACCTTATGAATGTCCCTTATGCTGGGAATCACAACATTCTGCTCACAAGCTTGACGACCATGCCAGTTTATGAAGCAGATTTTGGTTGGGGAAAGCCCTTGCATTATGGTGTAGCACGTGCCTTTCAAGAAGATAGAGCAGTGATTGTTCGAAGCCCTGATGGGAACGGTGTTCTTGTCACCATATTCTTCCAGACTGCACTTATGCAGCTTTTTCAAAAGAAATTCTACGAGGATTTGTTTGTGTCCTCTTTATAA 1341 0.4377 MVTIVGSYNVTPNQPTPSEPLWLSDSDQIGFLGHVPNIFIYKAKHTGNPIERMRNSLSKTLVHYYPVAGRLRLTKDDRMEVDCNAKGVMLLDAESTKSFDDYGDFSPSESTEELVPKVDYTQPIEEIPLLLFQVTRFHGGEGLALGVVISHPVTDATGIIHLVNNWAKVARGEELQPNEIPFLDRTGLKLPHQHSSPSVKLPEWKPVPQTPQIEQKKRSASLLKLTSSQVEALKKKANEKPSKVGVRPYTRFEAVAAHIWRCAAKARESGENHPTFVRFSVNFRSRLNPPLPQNYFGNALAKGVTPKCYEGDIISNPLGFSAEKIREATHAVTDEFIWSQLKASLGQGQQDHIRAFFKGQGHLMNVPYAGNHNILLTSLTTMPVYEADFGWGKPLHYGVARAFQEDRAVIVRSPDGNGVLVTIFFQTALMQLFQKKFYEDLFVSSL* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02660 446 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 437 - -
Lapu6g02660 446 Gene3D - 1 203 IPR023213 -
Lapu6g02660 446 Gene3D - 204 438 IPR023213 -
Lapu6g02660 446 Pfam Transferase family 1 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02660 Lapu-Chr6 26986296 26987636 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02660 2 439 Monolignol Biosynthesis Gene Families AT5G48930 34.228 7.10e-77 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02660 K13065 - gmx:100802888 656.751