Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02647 ATGATTTCCTCCTTGAGACAGCCTGTTGTGGGGATCAGTGGTTCTGATCTTTTGAGGCAAAGACATGCAACCCCTGTTAAGGCACGGTCGTTTTTGCCTTCTTTGTCAAGAGAAAAGGGGCAGGGATCTCTGGTTTCAGTGCATAAGCCACTGCACATTGCTTCTTCTCTTGGTGGTGGAAATTTCGTGTCGGTGAAGAGTGATGGAAGGAGTGATGTGGTGAAGTGTGAGGCCTATGAGGCAGACAGATCAGAGGTTGAGGCTACGAACACACCATCAGAGGCTGCAAAGAAGGTGAAAATTGGGATATATTTCGCAACCTGGTGGGCTCTGAATGTGGTGTTCAATATTTATAACAAGAAGGTGTTGAATGCCTACCCCTACCCTTGGCTGACTTCAACTCTCTCACTTGCATGTGGGTCTCTTATGATGTTGATCTCTTGGGCCACTGGGATTGCAGAAGCCCCCAAGACTGATCCTGAGTTTTGGAAGTCTTTGTTCCCTGTTGCCGTTGCACATACAATAGGACATGTAGCAGCAACTGTTAGTATGTCAAAAGTTGCGGTATCATTTACACATATAATCAAGAGTGGTGAGCCTGCTTTTAGTGTTCTGGTTTCAAGATTTCTCTTGGGTGAGACCTTCCCTGTGCCAGTCTATCTGTCTTTACTTCCGATCATTGGTGGATGTGCACTTGCAGCCGTGACTGAACTCAATTTCAACATGACTGGTTTTATGGGGGCTATGATATCGAATTTGGCATTTGTATTCCGTAATATCTTTTCGAAAAAGGGCATGAAGGGAAAGTCTGTCAGTGGAATGAATTACTATGCTTGTTTATCTATTCTGTCCCTTGCAATTCTCACACCCTTTGCAATTGCCGTGGAAGGACCACAGATGTGGATTGCGGGATGGCAAACGGCCATCTCTCAGATTGGAAACCAACTCATATGGTGGGTAGCAGCTCAAAGTGTATTCTATCATCTATACAATCAAGTGTCATACATGTCTCTGGATGAGATCTCTCCTTTGACGTTTAGCATTGGAAATACCATGAAACGTATATCTGTCATAGTGTCTTCGATTATTATCTTCCACACACCAGTTCAACCCGTCAATGCTCTTGGTGCCGCGATTGCCATCCTTGGAACATTCTTATATTCACAGGCAAAACAATAG 1179 0.4453 MISSLRQPVVGISGSDLLRQRHATPVKARSFLPSLSREKGQGSLVSVHKPLHIASSLGGGNFVSVKSDGRSDVVKCEAYEADRSEVEATNTPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATGIAEAPKTDPEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLAILTPFAIAVEGPQMWIAGWQTAISQIGNQLIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFLYSQAKQ* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02647 392 PANTHER SOLUTE CARRIER FAMILY 35 100 391 - -
Lapu6g02647 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 143 235 - -
Lapu6g02647 392 Pfam Triose-phosphate Transporter family 100 388 IPR004853 -
Lapu6g02647 392 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 100 391 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02647 Lapu-Chr6 26721445 26727313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02647 36 391 Antiporters AT5G54800 80.992 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02647 K15283 - gmx:100801832 716.457