Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02635 ATGATTGGTGAAGGAGGCTTTGGAAGGGTCTACAAAGGACGCCTTAAAAGCACAAATCAAGTTGTTGCTGTGAAACAACTTGACAGAAATGGATTTCAAGGAAACAGGGAATTTATTGTAGAGGTTTTGATTTTGAGTCTTTTGCACCACCCAAATCTCGTCAACTTGATAGGTTATTGTGCTGAAGGTGAACATAGAATTTTGGTATATGAATACATGGTCAATGGTTCTTTAGAAGATCACTTACTTGACTTAACTGATGAATCAAAGCCTTTGGACTGGTATACCAGAATGAAAATTGCAGAAGGTGCAGCAAAAGGACTTGAATATTTGCATGACCAAGCAAATCCTCCAGTGATATACCGTGATTTCAAAGCATCAAACATATTGTTAGATGAACACTTCAATCCCAAACTCTCTGATTTTGGACTTGCAAAGCTTGGTCCAACAGGAGACAAAAGACATGTGTCTACCAGAGTGATGGGAACATATGGATACTGTGCACCTGAGTATGCATCAACAGGGCAATTGACTACAAAATCAGATGTGTATAGCTATGGAGTGGTGTTTTTGGAGATGATCACAGGAAGAAGAGTAATTGAATATTCAAGACCAGAAGAAGAGCAAAATTTAGTTGTTTGGGCACAACCACTTCTAAAAGATAGGAAGAAATTTACACAAATGGCAGATCCATTACTAGAAGACAATTATCCTATAAAGAGTTTATATCAAGCTCTAGCAGTGGCTGCAATGTGTCTCCAAGAAGAAGATGAAACTCGACCTTTGATAAGTGATGTAGTTACAGCCATTGAATTTTTAGGAAGAAAGAAAGTAGAAATGGATGAACTACAACATACAAAACAAATTTCTTCTACTCAAGAAGGAGATAATGAAAATGAGAAT 903 0.371 MIGEGGFGRVYKGRLKSTNQVVAVKQLDRNGFQGNREFIVEVLILSLLHHPNLVNLIGYCAEGEHRILVYEYMVNGSLEDHLLDLTDESKPLDWYTRMKIAEGAAKGLEYLHDQANPPVIYRDFKASNILLDEHFNPKLSDFGLAKLGPTGDKRHVSTRVMGTYGYCAPEYASTGQLTTKSDVYSYGVVFLEMITGRRVIEYSRPEEEQNLVVWAQPLLKDRKKFTQMADPLLEDNYPIKSLYQALAVAAMCLQEEDETRPLISDVVTAIEFLGRKKVEMDELQHTKQISSTQEGDNENEN 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02635 301 PIRSF TyrPK_CSF1-R 77 301 - -
Lapu6g02635 301 PIRSF TyrPK_CSF1-R 1 84 - -
Lapu6g02635 301 SUPERFAMILY Protein kinase-like (PK-like) 1 274 IPR011009 -
Lapu6g02635 301 FunFam Serine/threonine-protein kinase PBS1 73 289 - -
Lapu6g02635 301 Pfam Protein kinase domain 2 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02635 301 Gene3D Transferase(Phosphotransferase) domain 1 74 298 - -
Lapu6g02635 301 ProSitePatterns Protein kinases ATP-binding region signature. 2 25 IPR017441 GO:0005524
Lapu6g02635 301 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Lapu6g02635 301 CDD STKc_IRAK 2 271 - -
Lapu6g02635 301 ProSiteProfiles Protein kinase domain profile. 1 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02635 301 PANTHER OS07G0668900 PROTEIN 1 282 - -
Lapu6g02635 301 Gene3D Phosphorylase Kinase; domain 1 2 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02635 Lapu-Chr6 26585421 26587731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02635 1 274 Glycoside Hydrolase AT3G07070 74.453 5.04e-154 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lapu6g02635 Pkinase 2.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02635 - - gmx:100790474 543.888