Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02587 ATGAAGAAGATGTGGGTTTGGCATCATCGATTGTTTCTTCTCTGCATTCTTTGTGGCCTCTGTTTTTCTCTGCAGTTCACAAGGGGTTATGCAGATTCAAGTTCTGGAAGAATTTTGAATCAGGTGGGAGGTGATCATCAGATACATTGCTCTAGAGAAAGAAGTAGAATAGCTTGGAAGATCATTCAAGAGTATTTGATGCCCTTTGTGGAGAAAGAAAAATATCATATCCCAAAAAGGTGTAGGTTTCACCCCGACAATGACATATACAGAGATCAGGAGCAGCATAAGTTTCATACAGATATAAATGAATGGCAGTGTGGGTACTGTAAGAAAAGTTTCTACGAAGAGAAACATCTCGATCAGCATTTTGACAACAGACACTCCAATTTGCTTAATTTGAATGAAAGCCAGTGCTTAGCAGATGTATGTGGTGCACTGCACTGTGACCATGAAATGAATTCTGGTTCAAAAAAGTCAAAGTGCAATCCTGCTGCAGCTGCAAGAAATAAACATCTTTGTGAGAGCATAGCCGATAGTTGTTTTCCAATTAATGAGGGTCCTGCAACAAGCCGACTTCATGAATTGTTCTTGCACCAATTCTGTGATGCACACAGCTGCACTGGAAGTAGACAACCTTTCTCCAGAGGACGCAGGAAGAAGACAAATGTGTTCTACATCTTTGTGTCTATTTTGCTTGTGATACTGCTGCTACTATACTATCTCTACATTTACTTATATCAAAGAGGAATGAAAAAGGAAACTCAAGTGCTGAAGCGCATCTCACAAACCAGCAGAAAGAAAAAGCCATCCTAA 816 0.3995 MKKMWVWHHRLFLLCILCGLCFSLQFTRGYADSSSGRILNQVGGDHQIHCSRERSRIAWKIIQEYLMPFVEKEKYHIPKRCRFHPDNDIYRDQEQHKFHTDINEWQCGYCKKSFYEEKHLDQHFDNRHSNLLNLNESQCLADVCGALHCDHEMNSGSKKSKCNPAAAARNKHLCESIADSCFPINEGPATSRLHELFLHQFCDAHSCTGSRQPFSRGRRKKTNVFYIFVSILLVILLLLYYLYIYLYQRGMKKETQVLKRISQTSRKKKPS* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02587 271 ProSitePatterns Zinc finger C2H2 type domain signature. 107 128 IPR013087 -
Lapu6g02587 271 ProSiteProfiles Zinc finger C2H2 type domain profile. 105 130 IPR013087 -
Lapu6g02587 271 PANTHER ZINC FINGER PROTEIN-RELATED 7 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02587 Lapu-Chr6 25969429 25974061 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02587 27 271 C2H2 Transcription Factor Family AT5G63280 59.274 3.91e-109 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lapu6g02587 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02587 - - gmx:100527694 480.33