Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02560 ATGGGTTTCCTGGTGACGACGCTGATCTTTGTAGTGATCGGAATCATCGCGAGCCTCTGCACCAGAATCTGTTGCAACAGAGGACCTTCTACCAATCTATTTCACCTAACTTTGGTAATTACTGCAACAATTTGCTGCTGGATGATGTGGGCGATTGTATATCTGGCACAGATGAAACCACTCATTGTACCTATACTGAGTGAGGGCGAATAA 213 0.4507 MGFLVTTLIFVVIGIIASLCTRICCNRGPSTNLFHLTLVITATICCWMMWAIVYLAQMKPLIVPILSEGE* 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02560 70 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT H 1 68 IPR008389 GO:0033179|GO:0046961|GO:1902600
Lapu6g02560 70 Pfam ATP synthase subunit H 3 67 IPR008389 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02560 Lapu-Chr6 25575308 25577522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02560 1 70 Primary Pumps ATPases(2) AT5G55290 88.571 4.17e-42 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02560 K02153 - qsu:112038065 145.976
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02560 6 25575308 25577522 Lapu6g02560 6 25575308 25577522 ECH