Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02551 ATGGTGCCACTGAATTTGGTCTATGAGGGTATCAGGAATTTGGCTCATGAACATGCACAAGTGGTGCCTATGTCATTTTTTGTGGCTGTTCTCTGCCTTTGTTTGGTCATTGGTCACTTGCTTGAAGAAAATAGATGGGTTAATGAATCCATTCTTGCCATTATAGTAGGAATCATTGCTGGAATTATACTGTTATTGGTCACCAAAGGAAAGAGTTCTCACATCCTTAGATTTAATGAAGAACTATTCTTCATATATCTCCTTCCTCCAATAATATTCAATGCAGGAGTTAACCCTCCTAACAGATTTCAGGTGAAGAAGAAACAATTCTTCCATAACTTTTTAACCATCATGATGTTTGGTGTCATCGGTGTTTTTGTTTCAACTTTTGTTATTACTTGCGGCAGCTGGTGGATATTCCCCAAGTTGAATTTGCTTGGCCTGAGTGGACAAGATTATCTTGCTATAGGAACAATTTTCTCATCAACGGACACAGTTTGTACCCTGCAGGTTCTGCATCAAGATGAAACTCCTTTACTATACAGCCTAGTCTTCGGGGAAGGAGTGGTAAATGATGCCACATCAGTTGTTCTCTTCAATGCAGTGCAAAAGCTTGATGTTTCAAGATTTAGCAGCAAGACATTCCGAGTTATTGGAGATTTCTTCTATCTATTCGTGCTAAGCACTGGTCTTGGAGTTCTAGCTGGCCTCCTCACATCATATATCTTGAAAGCCTTAAGCTTTGGAAGACATTCAAGTGTTCGTGAAATTGCGTTGATGATGTTAATGGCATACCTATCCTACATGTTGGCAGAGCTATGTGATCTAAGTGGAATCCTCACCGTTTTCTTTTGTGGAATACTAATGTCACATTATGCATGGTATAATGTGACCGAAACTTCAAGAATCACAACCAGGCATGCGTTTGCAACAATGTCATTTATTGCAGAAACGTTCATATTTCTATATGTGGGCATGGATGCCCTTGACATTGAGAAGTGGAAGATGACTAAATTAAGTTACGGAAATTTGTTGGGGATATACAGTTCCTTAATCCTATTGATATTGCTTGGGCGGGCAGCATTTGTTTTCTCTCTCTCTGCTGTTGCCAATTATACGAACACACGTGCTAGTTCTGACCATGCATCACGCATCACTTTCAGACATCAGATAATCATTTGGTGGGCTGGTCTGATGAGGGGAGCTGTGTCCATTGCTCTGGCTTTCAAACAGTTCACATTTTCTGGAGTTACTTCTGATCCAGTTAAAGCAACAATGATTACCAACACCATTATTGTTGTCCTTTTCAGCACACTGGTGTTTGGTTTTCTCACAAAACCATTAATCAGATATCTGCTACCCCACACTGCTACAAGGAAAAACATCAGCCATGAAGAATCAGGTCCACCAATTGAGGACTTGAATCTACCTTTGTTATCCCTTGATGAGTCCGCAGCCACCAACATCAGCCGCGCAAAGGAAAGTTTGTCCATGTTAATAGGAAGTCCTGTGTTCACCATACATCACTATTGGAGGAGGTTCGATGATGCCTACATGAGACCATTTTTTGGGGGACCTCATCATAACGGGTCACAGTGCTAG 1602 0.4095 MVPLNLVYEGIRNLAHEHAQVVPMSFFVAVLCLCLVIGHLLEENRWVNESILAIIVGIIAGIILLLVTKGKSSHILRFNEELFFIYLLPPIIFNAGVNPPNRFQVKKKQFFHNFLTIMMFGVIGVFVSTFVITCGSWWIFPKLNLLGLSGQDYLAIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLDVSRFSSKTFRVIGDFFYLFVLSTGLGVLAGLLTSYILKALSFGRHSSVREIALMMLMAYLSYMLAELCDLSGILTVFFCGILMSHYAWYNVTETSRITTRHAFATMSFIAETFIFLYVGMDALDIEKWKMTKLSYGNLLGIYSSLILLILLGRAAFVFSLSAVANYTNTRASSDHASRITFRHQIIIWWAGLMRGAVSIALAFKQFTFSGVTSDPVKATMITNTIIVVLFSTLVFGFLTKPLIRYLLPHTATRKNISHEESGPPIEDLNLPLLSLDESAATNISRAKESLSMLIGSPVFTIHHYWRRFDDAYMRPFFGGPHHNGSQC* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02551 533 Gene3D - 149 201 - -
Lapu6g02551 533 PANTHER SODIUM/HYDROGEN EXCHANGER 18 523 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Lapu6g02551 533 Pfam Sodium/hydrogen exchanger family 29 449 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02551 Lapu-Chr6 25491688 25498360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02551 12 533 Antiporters AT5G55470 68.880 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02551 - - gmx:100813332 901.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02551 6 25491688 25498360 Lapu6g02551 6 25491688 25498360 ECH