Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02544 ATGCCACCGAGAAAAGCTTGCAGTTTTTTGAGCGAGCCTTGTCTCGTTGCCAAGAAATTCTTGGCAAGACCTCAGCATGAGGGTGTTGGGGCTGTTGTTAGAAGAAGCATAGGAAGGTTTGAGCTCAAGTACTTTGATCCATTCCTTTTGTTGGATGAATTCTCAGTTACTGCTCCTGCTGGTTTTCCTGATCATCCTCATAGAGGCTTTGAGACAGTCACATACATGTTGCAGGGAGCTATCACGCATGAAGATTTTGAAGGACATAAAGGGACTATAGAAGCTGGTGACTTGCAATGGATGACTGCAGGGAGAGGGATTGTGCACTCAGAAATGCCTGCTGCTCAAGGAACTCAAAAGGGTCTTCAATTGTGGATCAACCTTGCTTCCAAATATAAAATGATTGAACCAAGGTATCAAGAAGTGTTGAGTAAGGACATAGTAGAAGCTGAGAATGATGGTGTGAAGATTAGAGTTATAGCTGGGGAAGCACTAGGGGTGATGTCTCCAATCTATACAAGGACTCCAACTATGTTCTTGGACTTGTCTCTCAAACCTGGAAGTTACTTGCAACAACCTATACCAAAATCTTGGAATGCTTTTGTGTATATTTTGGAAGGAGAGGGTATCTTTGGAAACATGAAATCTCAACCTTCAAATTCTCATCACATTCTTCTTCTTGGTCATGGAGATGGCCTAGAGGCATGGAACAAATCTTCTAAGCTCCTTAGGTTCATTTTGGTTGGAGGAGAACCTTTGGGGGAACCTATAGTGCAATTTGGACCCTTTGTGATGAACACTCAAGAAGAGATTGACCAAGCCAGTCATGATTTTGAGAACTTTGCTAACGGATTTGAGAAAGCAAGAGATTGGAGATCTGAAATTAATTAA 891 0.4209 MPPRKACSFLSEPCLVAKKFLARPQHEGVGAVVRRSIGRFELKYFDPFLLLDEFSVTAPAGFPDHPHRGFETVTYMLQGAITHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLASKYKMIEPRYQEVLSKDIVEAENDGVKIRVIAGEALGVMSPIYTRTPTMFLDLSLKPGSYLQQPIPKSWNAFVYILEGEGIFGNMKSQPSNSHHILLLGHGDGLEAWNKSSKLLRFILVGGEPLGEPIVQFGPFVMNTQEEIDQASHDFENFANGFEKARDWRSEIN* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02544 296 Gene3D Jelly Rolls 27 279 IPR014710 -
Lapu6g02544 296 Pfam Pirin C-terminal cupin domain 179 283 IPR008778 -
Lapu6g02544 296 CDD cupin_pirin_C 176 252 - -
Lapu6g02544 296 PIRSF Pirin 12 292 IPR012093 -
Lapu6g02544 296 CDD cupin_pirin_N 31 128 - -
Lapu6g02544 296 Gene3D Jelly Rolls 148 253 IPR014710 -
Lapu6g02544 296 Pfam Pirin 33 126 IPR003829 -
Lapu6g02544 296 PANTHER PIRIN-RELATED 11 295 IPR012093 -
Lapu6g02544 296 FunFam pirin 27 163 - -
Lapu6g02544 296 SUPERFAMILY RmlC-like cupins 16 294 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02544 Lapu-Chr6 25420047 25423940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02544 11 289 Calmodulin-binding Proteins AT3G59220 59.431 3.31e-123 352