Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02538 ATGACTGAAACTGCAGTGTCCTTGGTTGGTCAGCATGTGCTTCCAAAACTTTTTGAAGCTATGAAAATGCTGAGAGATCTCCCAAAAGAAGTTGCAGAACTTACTGATGAACTTGATGGCTTTCAAGATTTCATCAAAGCTGCAGATAAACTGGCTGAAGATGAAGAAGATAACAATAGGCGAGAGAGAATCAAAAGAAGGGTGATGCAACTGAGAGAAGCAACTTTTCTCATGGAAGATGTCATTGATGAATATGTGATTTGTGAGGAAAAGCAACCTCAAGATGATCCTCGATGTGCAGCTTTACTATGTGAGGGTGTTGGCTACATCAAAACTCTTATACTTCGCCTTCAAATAGCGTATAAGATTCAGGATGTTAAATCACTTGCTCATGTTGAAAGAGATGGTTTTCAAAACAAATTTCCTTTAGAACAAAGACCAAACAATTCAAGAGGAGATCAAAAGATCACCTCACACAAACTTCGAATGAATCCTCTCCTTGTCAAGGAAGAAGAGGTTGTAGGCCTTGATGGCCCTAGACATATATTGAAAAACTGGTTGACAAATGGACGAGAAGAACGAACTGTGATCTCTATCGTCGGAATTCCAGGGGTGGGAAAAACCACTCTAGCTAAGCAAGTTTTTGACAAGGTCCATAACGACTTTGAGTGCCATGCATTGATCACAGTGTCTCAATCCTATAAAGTAGAAGTTTTGCTAAAGAATATGTTGGAAGAGCTTTGCAATGAGAAAATGGAGGCTCTTCCTCAAAATGTTGCTGCAATGGATCAAAGGTCGTTGATAAAAGAAGTTCGAAAGCACTTGCACAATAAGAGGTATGTTGTCTTGTTCGACGACGTGTGGAATAAAAACTTTTGGGATGACATTGAATCTGCTATGATCGATGATAAAAATAAAAGCAGAATATTAATCACAACCAGGTACGAAAATGTTGCATATTTTTGTAAGAAATCTTCTTTTATTGAAGTGCATAAGCTTAAAGAACCTTTAAGTGAAGAAGAATCTTTGAGATTGCTCTGTAAGAGGGCATTTTATGGTTCTGATGGAAGTTGTCCACAAGAACTTAAAGATATATCTCTTGAAATTGTTAGAAGGTGTAAATGTTTACCTCTAGCAATTGTGGTCATCGGTGGTCTTTTATCTCTAGAAGATAAAACTGCAGCCAAATGGGCACTGTTTAGTAAAAATCTAAGTTTAGGGTTGGATAGTAACTCTGAGTTAAGTATTATAACAAAAATTTTAAGTTTAAGTTACAATGATTTGCCGTACAATCTCAGATTATGCTTATTGTATTTTGGAATGTATCCAGAAGACTATGAAGTTAAATCTGGTAGATTGATTCGGCAGTGGATAGCTGAAGGGTTTGTTAAACATGAAAGGGGAAAAACTTTAGAAGAAGTTGCACAACAACATTTAAAGGAGTTGATCACTAGAAGTTTGGTGCAAGTATCTTCCTTTTCTATAGATGGAAAAGTTAGAGAATGTCGTGTTCATGACTCAATACATGAAATGATCCGTGGAAAAATGAAGGATACAGGCTTTTGTGAGTATATTGATGAGAACAATCCATCATTGTCTAGTGGAATCATTAGACGCTTAACAATAGCAACCGATTCCGAGGATTTAATTGGGGAAGGATCACACATTCGGTCAATTCTATTTTTCTCAGACCTTGAATATTTTGAAAGCTGCGTTGGTGGAATACTTGCAAAATACATGCCATTGAAGGTACTTGATTTTGAAGACGTTGTGGTATACGATGTTCCAGAAATTTTGGGGAATCTAATCCACTTGAAATATCTAAGCTTCAGGAATTCATGGATAGAAAGTCTTCCAAAATCCATTGGTAAGCTCCAAAACTTGGAGACCTTGGATGTACGACAAACAGAAGTGTATGACATGCCAAAGGAGATTTGCAATCTTAGAAAGCTACGTCATCTTATGGCTGACAAAATATCTTCCACTTCAGTGAAGGATACTCTTGGAGGCATGACATCCTTACAAAAGATACAGTTCCTGGAAATAGATGACAATGGGGTGGTGATTAGAGAGCTAGGGAAGCTAAAGCAATTAAGGGATTTGAGGATTACCAATTTTAAGGAAGAACTCAGTAATACTCTATGTTCCTCAATCAATGAGATGCAGTTCTTTGAGACACTACATATATATGTAGAAGATGAGAATGAAGTTATTGACTTGCACTTTAAGTCATCCTTGAATGCACTTAGGAAGCTTTTCCTACATGGGACGCTAAAAATGTTACCAAATTGGATTCCACAACTTCAAAATCTTGTAAAATTGTCTTTGAAGTACTCTCAGTTAACTAATGATCCAATGGAATCAATAAAAGATATGCCAAATTTATTGTCCCTCTCTATCAAATACCATGCTTATGAAGGTGAAACTTTGCATTTTCAAAATGGAGGGTTTCAGAAACTAAAGGAACTAGGGCTCAAATATTTGCATAACCTGACTTCCATCTTTATTGATAGTGGAGCACTGGATTCTTTGGAAAAACTTTGTTTAAAGCAAATCCCCAAACTCAAGATGGTACCCTCTGGCATTCAACACTTAAAGAAACTCGAAGTTCTCACTATCTGGAAGATGCCAACTGAATTTGAACAAAACATTGTTCCCAATGGAGGAAAAGAACATTGGATGATCCAACATGTGCCCCATGTAATTATTCTCTAG 2715 0.3691 MTETAVSLVGQHVLPKLFEAMKMLRDLPKEVAELTDELDGFQDFIKAADKLAEDEEDNNRRERIKRRVMQLREATFLMEDVIDEYVICEEKQPQDDPRCAALLCEGVGYIKTLILRLQIAYKIQDVKSLAHVERDGFQNKFPLEQRPNNSRGDQKITSHKLRMNPLLVKEEEVVGLDGPRHILKNWLTNGREERTVISIVGIPGVGKTTLAKQVFDKVHNDFECHALITVSQSYKVEVLLKNMLEELCNEKMEALPQNVAAMDQRSLIKEVRKHLHNKRYVVLFDDVWNKNFWDDIESAMIDDKNKSRILITTRYENVAYFCKKSSFIEVHKLKEPLSEEESLRLLCKRAFYGSDGSCPQELKDISLEIVRRCKCLPLAIVVIGGLLSLEDKTAAKWALFSKNLSLGLDSNSELSIITKILSLSYNDLPYNLRLCLLYFGMYPEDYEVKSGRLIRQWIAEGFVKHERGKTLEEVAQQHLKELITRSLVQVSSFSIDGKVRECRVHDSIHEMIRGKMKDTGFCEYIDENNPSLSSGIIRRLTIATDSEDLIGEGSHIRSILFFSDLEYFESCVGGILAKYMPLKVLDFEDVVVYDVPEILGNLIHLKYLSFRNSWIESLPKSIGKLQNLETLDVRQTEVYDMPKEICNLRKLRHLMADKISSTSVKDTLGGMTSLQKIQFLEIDDNGVVIRELGKLKQLRDLRITNFKEELSNTLCSSINEMQFFETLHIYVEDENEVIDLHFKSSLNALRKLFLHGTLKMLPNWIPQLQNLVKLSLKYSQLTNDPMESIKDMPNLLSLSIKYHAYEGETLHFQNGGFQKLKELGLKYLHNLTSIFIDSGALDSLEKLCLKQIPKLKMVPSGIQHLKKLEVLTIWKMPTEFEQNIVPNGGKEHWMIQHVPHVIIL* 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02538 904 FunFam Probable disease resistance protein At1g63360 425 513 - -
Lapu6g02538 904 Pfam NB-ARC domain 183 427 IPR002182 GO:0043531
Lapu6g02538 904 Pfam Rx N-terminal domain 5 93 IPR041118 -
Lapu6g02538 904 Gene3D - 425 516 IPR036388 -
Lapu6g02538 904 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 439 IPR027417 -
Lapu6g02538 904 PRINTS Disease resistance protein signature 373 387 - -
Lapu6g02538 904 PRINTS Disease resistance protein signature 196 211 - -
Lapu6g02538 904 PRINTS Disease resistance protein signature 274 288 - -
Lapu6g02538 904 PRINTS Disease resistance protein signature 623 639 - -
Lapu6g02538 904 PANTHER DISEASE RESISTANCE PROTEIN RP 50 847 IPR044974 GO:0006952
Lapu6g02538 904 Gene3D - 159 331 IPR027417 -
Lapu6g02538 904 FunFam Probable disease resistance protein At1g61300 156 326 - -
Lapu6g02538 904 SUPERFAMILY L domain-like 503 880 - -
Lapu6g02538 904 Gene3D Ribonuclease Inhibitor 560 887 IPR032675 -
Lapu6g02538 904 Gene3D - 336 424 IPR042197 -
Lapu6g02538 904 Gene3D - 4 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02538 Lapu-Chr6 25388158 25391124 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02538 197 384 WRKY Transcription Factor Family AT5G45050 30.000 4.41e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02538 K13457 - gmx:121174068 1108.2