Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02535 ATGGCAGAAAGTGCAGTGTCCTTCGCTGGTCAGCATGTGGTTCCAAAAATTTTGGAAGCTGTCAAAATGCTGAGAGATCTCCCAAAAGAAGTTGCAGACGCGAAAGATGAACTGGAAAGTTTTCAAGATTTCATCAATGATGCATATAAAGTGGCTGAAGCTGAAGAAAGTAACAGTAGGCGTGAGCGTATCAAAAAAAGGTTGATGCGACTGAGAGAAGCTGCTTTTCGCATGGAAGATGTCATCGACGAATATGCGATCTTCTGTGAGGAAATACCACCTCAAGATGATCGTCGATGTGCAGCTTTACTCTGTGAGGCTGTTGACTTTGTCAAAACTCAGATCCTTCGCCTTCAAATAGCATATAAGATTCAGGATGTTAAATCACTTGCTTCGGTTGAAAGAGATGGTTTCCAAAGCCATTTTCCTTTAGAACAAAGACCGAACAGTTCTAGAGGAAATGAAGATGTTACATGGCTCAAACTTCGAATGGATCCTCTCTTTATTAAGGAAGATGAGGTTGTAGGCTTTGAAGGCCCTATAGATATATTAAGAAAACTGTTGATGGGGGGACAAAAAGGGCGCACTGTCATCTCTGTAGTAGGAATGGCTGGATTGGGGAAAACCACTCTTGCTAAGCAAGTTTTTGACAAAGTCCATACAGACTTTGAGTGCCATGCATTGATCACAGTATCTCAATCCTATACTGTTGAGGGATTACTGAGAGATATGACGAACAAGTTTTGCAATGAAAAAATGGAGCATCCTCCTCAGAATCTTTCTACTATGGATCAAAGGTCGTTGATAGAAGAAGTCAGAAACCGCTTGCGCAATAAGAGGTATGTTGTTTTGTTTGATGACATATGGAATGAAACATTTTGGGATGACATTGAATTAGCTCTGGTTGATAACAAAAATGGAAGTAGAATATTAATCACTACCAGGGATGAGAAGGTTGCGGAGTTCTGTAAGAAATCTTCAATTGTTGAGGTACACAAGCTAGAACCTTTAACTAAAGAAAAATCTTTGGAGTTATTATGCAAGAAGGCATTTGGGTATGGTTTTGATGGATGTTGTCCAAAAGAATATGAAGATGGCAAAGTTGGAGGATGTCGCGTTCATGACTCCATACATGAAATGATCGTTGGAAAGATCAAGGATACAGGGTTTTGTCAGGATACTGCTGAGCATAGTCAATTGGTGTCAGGTGGAATCATGAGACGCTTAACGATAGTAACAAGTTCAAATCATTTAATTGGAACTATTGAAAGATCACACGTTCGGTCAATTATAATTTTCACAAAGGAAGAGTTGTCTGAACACTTCATCAGTGGAATCTTCAAGAAATACATGCCTCTGAAGGTACTCGATTTTGAAAATGCTCGATTATCTCATGTTCCTGAAAATTTGGGGAATTTAATCCACTTGAAGTATTTAAGCTTCAGGAATACACAAATAAAAAGCCTTCCAAAATCCATTGGTAATCTCCAGAACTTGGAGACCTTGGATGCACGACAAACAAATGTGTCTGAGGTGCCAAAGGAGATTCTCAAGCTTAGAAAACTACGTCATCTTCTGGCTAACAGAATATCTTTCACTGCTGTGAAGGATAGTCTTGGAGGCATGGCATCCTTGGAAAAGATTAGTGTGTTGATAGTAGATAATGATGGAATGGTGATTCGAGAGCTAGGGAAGCTAAAGAAGTTAAGGGATCTGAGGATTACTAATTTTAGGGGACAATATAGTAGCATCCTATGCTCATCAATAAATGAGATGCAACAGTTGCAGACACTGGTTATTTGGACAGAAGATAACAATGAAATTATTGACTTGCACTCTATGCCATCCTTATCTACACTTAGCAAACTTTTTCTGGCTGCCAAGTTAAAAAAGTTGCCAAATTGGATTCCGCGGCTCCAAAATCTGGTGGAGTTGGTTTTGATGTACTCCAACTTATCAAACAATCCTTTGGAGTTACTCAAAGATATGCCAAATTTGTTGTCCATCTGGCCTATAAAGCACTTGGAGAAACTCAAAGTTCTCGAAATCTGGTTAATGCCTATTGAATTTGAGGACAGCATTGCTCCCAGTGGAGGAGAAAAAAATTGGATGATCCAACATGTGCCCCATGTTAATATCATTGCTTCGCTCAGGGCCAAGAGAGCAGAGTTAGAATTTATAGAGTATCTGGATTTAGAAATCAAAGGTCAAGATTTTAGCATAAATGGCAAGAATTGA 2238 0.3923 MAESAVSFAGQHVVPKILEAVKMLRDLPKEVADAKDELESFQDFINDAYKVAEAEESNSRRERIKKRLMRLREAAFRMEDVIDEYAIFCEEIPPQDDRRCAALLCEAVDFVKTQILRLQIAYKIQDVKSLASVERDGFQSHFPLEQRPNSSRGNEDVTWLKLRMDPLFIKEDEVVGFEGPIDILRKLLMGGQKGRTVISVVGMAGLGKTTLAKQVFDKVHTDFECHALITVSQSYTVEGLLRDMTNKFCNEKMEHPPQNLSTMDQRSLIEEVRNRLRNKRYVVLFDDIWNETFWDDIELALVDNKNGSRILITTRDEKVAEFCKKSSIVEVHKLEPLTKEKSLELLCKKAFGYGFDGCCPKEYEDGKVGGCRVHDSIHEMIVGKIKDTGFCQDTAEHSQLVSGGIMRRLTIVTSSNHLIGTIERSHVRSIIIFTKEELSEHFISGIFKKYMPLKVLDFENARLSHVPENLGNLIHLKYLSFRNTQIKSLPKSIGNLQNLETLDARQTNVSEVPKEILKLRKLRHLLANRISFTAVKDSLGGMASLEKISVLIVDNDGMVIRELGKLKKLRDLRITNFRGQYSSILCSSINEMQQLQTLVIWTEDNNEIIDLHSMPSLSTLSKLFLAAKLKKLPNWIPRLQNLVELVLMYSNLSNNPLELLKDMPNLLSIWPIKHLEKLKVLEIWLMPIEFEDSIAPSGGEKNWMIQHVPHVNIIASLRAKRAELEFIEYLDLEIKGQDFSINGKN* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02535 745 SUPERFAMILY L domain-like 372 690 - -
Lapu6g02535 745 Gene3D - 4 121 - -
Lapu6g02535 745 PRINTS Disease resistance protein signature 197 212 - -
Lapu6g02535 745 PRINTS Disease resistance protein signature 275 289 - -
Lapu6g02535 745 PRINTS Disease resistance protein signature 494 510 - -
Lapu6g02535 745 PANTHER DISEASE RESISTANCE PROTEIN RP 371 685 IPR044974 GO:0006952
Lapu6g02535 745 Pfam Rx N-terminal domain 5 87 IPR041118 -
Lapu6g02535 745 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 364 IPR027417 -
Lapu6g02535 745 Gene3D - 167 331 IPR027417 -
Lapu6g02535 745 Pfam NB-ARC domain 183 351 IPR002182 GO:0043531
Lapu6g02535 745 Gene3D Ribonuclease Inhibitor 421 732 IPR032675 -
Lapu6g02535 745 FunFam Probable disease resistance protein At1g61300 162 327 - -
Lapu6g02535 745 Coils Coil 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02535 Lapu-Chr6 25353796 25357513 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02535 198 346 WRKY Transcription Factor Family AT4G12020 32.000 2.68e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02535 - K13457 gmx:100806153 522.702