Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02534 ATGGTGAGAGATCTCCCAAAAGAAGTTGCAGAGATTAGAGATGAACTTGGAAACCTTCTAGATTTCATAAATGATGCAGATAAAGTGGCTGAAGCTGAAGAAGATAACAAAAGGCATGATAGAATGAAGGAAAGGTTGATGCGGCTGAGAGAAGCAGCTTTTCGCCTGGAAGATGTGATTGATGAATATTGGATCCGTGTTGAAGAAAAACAACCTCAAGAAGGTCCTCGATGGGCAGCTTCACTCTCTAAGGCTGTTGACTACATCAAAACCCTGATCCTTCGACTTCAAATAGCATATAAGATTCAGGATAAGAAATCAGTTGTTCGTGATGAAAAAGGTGGCTTTTTAAGCCAATATTCTTTAGAAACAAGACTAAACAGTTCTAGAGAAAATCAAAATGTCAGATTGCACCAACTTCGAATGGATTCTCTGTTTATTAAGGAAGAGGAGGTTGTTGGCCTTGCTGGACCTACAGACATACTGAAAGATTGGTTGGAAAAGGGACGAGAAGAACGCACTGTGATTTCTGTTGTAGGTATTCCAGGAGTTGGAAAAACCACTCTTGCCAAGCGTGTTTTTGACAAGGTCCATGACGGCTTTGAGTGCCATGCATTGATCACAGTCTCTCAATCCTACACTGTAGAAGGACTGTTGAGGGATATGATACACAAGCTTTGCAAGGAAAGCAAAAAAGATCAACCTTGTAATATTTCTTCGATGGCTCGAGACTCGTTGATAGAAGAAGTCAGAGATCTCTTGCAGCAGAAGAGGTATGTTGTCTTATTTGATGACGTATGGAATGAAACATTTTGGGATGACATTCAATCTGCTTTGATTGATGATAAAAATAAAAGTAGGATAATAATCACAACAAGGCACGAGAAGGTTGCGGTCTTCTGTAAGAAATCTTCTTTTATTGAAGTGCATAAGCTAGAAAAACCTTTAAGTGAAGATGAATCTTTGAGATTGTTCTGTATGAAGGCATTTAGGTATGGTTCTGCTGGAGTCTGTCCAGAAGAACTTAAAGACGTATCTCTTGAAATTGTTAGGAAGTGTAAAGGTTTACCGCTAGCAATTGTGGCCATTGGTGGAGTCTTGTCCCAAAAAGATGAAACTGCATATGAATGGAGACTGTTTAGTCAGAATCTGAGTTTAGAGTTGGAGAGGAATTCAGAATTAAACAACATAACAAAAATATTAGGTTTAAGTTATCATGATTTGCCGATCGATCTCAGATCATGTTTGTTGTATTTCGGAATGTATCCGGAAGACTGTGAAATTGAATCAGATAGATTGATTAGGCAGTGGGTAGCTGAAGGATTTGTCAGACATGAAGCCGGAAAAACTCTAGAAGATGTTGCACAAGAAGGTTTATTAGGGTTGATCCATAGAAGTTTGGTGCAAGTATCTTCATTTTCCACGGAAGGAAAAGTTAAAAAGTGTCGTGTTCATGACTTAATACACAACATGATCCGTAGAAAAGTCAAGGATACAAGATTTTGTGAGTATATTGGTGGTGGGCATGATCAATCTGAGTCAAGTGGGTTCGTTCGACGTCTGACAATTGCAACCAATGAGTTAAGTGGAATTACAAGTTATGAAAGCTCACTCATTCGGTCAATTATAGTCATTCCAGGAAAACAAGAAGAATTATTGTCTGACCACATGGTAAGAAAAATTCCTACAGATTACATGCTATTGAAGGTACTAGACTTAGAAGATTCTGGATTAGCTTGTGTTCCTAAAAAGTTGGGGAATTTAATCCACCTGAGGTATTTAAGCTTTAGGGGGACACAGATAGAAAGTCTTCCAAAATCCATTGGCAAGCTCATGAATTTGGAGACCTTGGACGTACGACAAACAAAAGTGTGTGAGATGCCAAAGGAGATAACCAAGCTTAGAAAGTTACGGCATCTTCTGACACCTAACACTGCATCTTCTTCAATTCAATGGAAGGATATTGGATGCATGCCAATGCTACAGAAGATACCACAAGTGCGTATGGAGGGTGATGGAGTGGCGATTAGAGAGGTAGGAAAGCTGAAGCAGCTAAGGGGTCTAAGGGTGCTTTATTCCAGCGGAAAGCACGAAAATTGTCTTTGCTCCTCAATAAACGAGATGCAACACTTGGAGGCACTACGTATTGAAACTGTTGATCGCAGTGAAGTAGCAGTTGACTTGAACATTACGCCACCCTCTAAACTTAGGAAGCTTTTCCTTGATATGAAGTTAGAAAGGTTGCCAAAGTGGATTTCTGAACTCCATAATCTTGTGAGATTGACCTTGCGGCTCTCTGGCTTAACTAATGATCCGTTGGAATCACTAAAAGATATGCCTAGTTTGTTGGTTCTCTCTTTAACCCACGCTTATGAAGGCCAAACTTTGCATTTTCAACCTGGAGGGTTTCAGAAACTAAGGAAGCTAAATCTTTCAAATCTTTGGAACTTGAATTCGATCCTTATTGATGAAAGAGCTCTGCAGTCTTTGGAATATTTGGAGTTAACATGCCTCCATGAACTCAGAACTGTACCCGTTGGCATTGAACATCTTGAGAAACTTAATTTTCTTGATGTCTTTTCTATGCCAACTGAATTTGTGGAGGAAATTGTACCCATTGGAAAAAATCAGCATTGGATCATCAATTATGGCTACATGTGA 2661 0.3942 MVRDLPKEVAEIRDELGNLLDFINDADKVAEAEEDNKRHDRMKERLMRLREAAFRLEDVIDEYWIRVEEKQPQEGPRWAASLSKAVDYIKTLILRLQIAYKIQDKKSVVRDEKGGFLSQYSLETRLNSSRENQNVRLHQLRMDSLFIKEEEVVGLAGPTDILKDWLEKGREERTVISVVGIPGVGKTTLAKRVFDKVHDGFECHALITVSQSYTVEGLLRDMIHKLCKESKKDQPCNISSMARDSLIEEVRDLLQQKRYVVLFDDVWNETFWDDIQSALIDDKNKSRIIITTRHEKVAVFCKKSSFIEVHKLEKPLSEDESLRLFCMKAFRYGSAGVCPEELKDVSLEIVRKCKGLPLAIVAIGGVLSQKDETAYEWRLFSQNLSLELERNSELNNITKILGLSYHDLPIDLRSCLLYFGMYPEDCEIESDRLIRQWVAEGFVRHEAGKTLEDVAQEGLLGLIHRSLVQVSSFSTEGKVKKCRVHDLIHNMIRRKVKDTRFCEYIGGGHDQSESSGFVRRLTIATNELSGITSYESSLIRSIIVIPGKQEELLSDHMVRKIPTDYMLLKVLDLEDSGLACVPKKLGNLIHLRYLSFRGTQIESLPKSIGKLMNLETLDVRQTKVCEMPKEITKLRKLRHLLTPNTASSSIQWKDIGCMPMLQKIPQVRMEGDGVAIREVGKLKQLRGLRVLYSSGKHENCLCSSINEMQHLEALRIETVDRSEVAVDLNITPPSKLRKLFLDMKLERLPKWISELHNLVRLTLRLSGLTNDPLESLKDMPSLLVLSLTHAYEGQTLHFQPGGFQKLRKLNLSNLWNLNSILIDERALQSLEYLELTCLHELRTVPVGIEHLEKLNFLDVFSMPTEFVEEIVPIGKNQHWIINYGYM* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02534 886 Coils Coil 29 59 - -
Lapu6g02534 886 PANTHER DISEASE RESISTANCE PROTEIN RP 44 830 IPR044974 GO:0006952
Lapu6g02534 886 FunFam Probable disease resistance protein At1g61300 135 305 - -
Lapu6g02534 886 Gene3D Ribonuclease Inhibitor 675 870 IPR032675 -
Lapu6g02534 886 Gene3D Ribonuclease Inhibitor 545 667 IPR032675 -
Lapu6g02534 886 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 419 IPR027417 -
Lapu6g02534 886 Gene3D - 315 404 IPR042197 -
Lapu6g02534 886 Pfam Rx N-terminal domain 3 72 IPR041118 -
Lapu6g02534 886 PRINTS Disease resistance protein signature 353 367 - -
Lapu6g02534 886 PRINTS Disease resistance protein signature 825 841 - -
Lapu6g02534 886 PRINTS Disease resistance protein signature 253 267 - -
Lapu6g02534 886 PRINTS Disease resistance protein signature 175 190 - -
Lapu6g02534 886 Pfam NB-ARC domain 161 406 IPR002182 GO:0043531
Lapu6g02534 886 Gene3D - 405 496 IPR036388 -
Lapu6g02534 886 Gene3D - 1 99 - -
Lapu6g02534 886 SUPERFAMILY L domain-like 483 868 - -
Lapu6g02534 886 Gene3D - 139 310 IPR027417 -
Lapu6g02534 886 FunFam Probable disease resistance protein At1g63360 405 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02534 Lapu-Chr6 25349636 25353016 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02534 176 364 WRKY Transcription Factor Family AT5G45050 29.101 2.47e-13 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02534 K13457 - gmx:100786451 1068.14