Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02533 ACCATTACCACACACCAAAACACAGAAAGAGAGAGAGAGAGAGAGAACTACATGGAAATAGGAGAGATAATTTCCTCCGTTATGTATATCTTATCAATACTTTGGGAAACTGTCAAAAAGCTGAGAGATCTCCCAGAAGAAGTTGCAGAGTTGAGAGATGAACTTAATTTCTTGCTAAAGGTAATCAATGATGAAGATAAAGTGCCTGAAGCTAGAGAAGTTGACAATCAGCCTTATGCAAGGAAGGAAAGCTTAATGCGGCTGAGACAAGAAGCTTTTCAGACGGAAGATGTGATTGACGAATATGTGATCCATATTGAAGAAAAAAAGCCTGAAGGTGGATGGGCAGCTTTCCCCTCCAAGTTTGTTTACTACATCAAAACTCTGATCCCTCAACTTCTAATAGCATATAGTATTCAGGAAAGGAAATCTGTTGTTCGTAAGAAAAGAGATGATTTTAGAAGCCTATATCCTTCAGAACCAAGCCTAAACAGTTCTGGAGAAAATCAAGATGTGACCTTGCACCCTCGATTGGATCCTCTGGAGACGGAAGAGAAGGTTGTTGGCCTTGCTGGACCTACAGACACATTCAAAGTTTGGTTGACAGAGGAAGAAGTAAGACGCACTGTGATTTCTGTTGTAGGTATTCCAGGAGTTGGAAAAACCACTCTTGCCAAACATGTTTTTGACCAGTTCCATAAATGCTTTGACTGCCATGCATTGATCACAGTCTCTCGTTCCTACAAAGATGTAGAACTGTTGAGGGATATGTTACACGGACTTTGCAAGGACAGAAGGAAATATCCACCTGCAATGAATCGAGTACAGTTGATAGACGCAATCAAAAAATGCTTGCGAGGGAAGAGCTACCTTGTCTTCTTTGATGACGTATGGAATGAAAAGTTTTGGGATGAGATAAAAAATGCTCTGATCGATGATGGTGAAAACAAAAGTAGGATAATAATCACAACAAGGGACGAGAAAGTTGCGGACTATTGTAAGAGATCTTCTTATGTTAGAGAACATAAGCTTGAAGAACCTCTAAGTGAAGAAGAATGTTTGAGATTGCTCCATAAGAAGGCACGTTATGGTTCTGATGGAGATTGTCCCGAAGCACTCAAAGATATATCTCTTGAAATTGTCAGGAAGTGTAAAGGTTTACCTCTAGCAATTGTGGTCGTTGGTGGTCTTTTGGCTGAAGTGGAAGAAAGTGCACTTGAATGGAGACGGTTTAGTGAAGATCTGGAGCGGAATCCTGGCTTAAATATTATAACAGAAATTATAGGTTTAAGTTACGATAATTTGCCGAACAATCTCAGATCATGTTTATTGTATTTCGGAATGTATCCGGAAGACTGTGAAATTGAATCTGATAGATTGATTAGGCAGTGGATAGCTGAAGGATTTGTTAAACCTATAGCCGGACAAGCTGTAGAAGAAGTTGCACAAGATTTATTAAAGGGGTTGATCCGTAGAAGTTTAGTGCAAGTATCTTCATTTTCCATGAAAGGAAAAGTTAAAAAATGTCGTGTTCATGACTCAATACTCGAGATGATCCGTAAAAAAGCCAAGGATACAAGATTTTGCGAGTATATTGATGGGCATGATCAATCTGGGTCAAGTGATGAACGCTCAACGTCTGACCCAAGATTCGTTCGACGTCTGACAATTGCAATCAATGAGTCAGTTAGAAGTTTTGAAAGCTCACTCATTCGTTCAATTATAGTCATTCCAGGAAAACAAGAAGAATTATCATCTGACCACTTGGTAAGCAAAATTCCTACAGATTACATGCCATTGAAGGTACTTGATTTTGAAGATTCTGGATTATCTTGTGTTCCTAAAAAGTTGGGGAAGTTAATCCACCTAAGGTATTTAAGCTTTAGGGGGACACAGATAAAAAGTCTTCTAAAATCCATTGGTAAGCTCCTGAACTTGGAGACCTTGGACGTACGACAAACAAAAGTGTGTGAGATGCCAAAGGAGATAACCAAGCTTAGAAAGTTACGGCATCTTCTGACACCTAACTCTGCATCTTCTTCAATTCAATGGAAGGATATTGGAGGCATGCCAATGCTACAAAAGATACCACAAGTGCGTATGGAGGATGATGGAGTGGCGATTAGAGAGGTAGGAAAGCTAAAGAAGCTAAGGAGCCTGAGGGTGCTTTATTTCGGCGGAAAGCACGAAAATTGTCTTTGCTCCTCGATAAATGGGATGACAAAATTGGAGGCTCTGCGTATTGAAAGTGTTGATCACAGTGAAGTAGCAGTTGACTTGAACATTACGCCATCCAAACTTAGGAAGCTTTTTCTTGATATGAAGTTAGAAAGGTTGCCAAATTGGATTCCTGAACTCAGTTATCTTGAGAGATTGATCTTGCGGCACTCTGGCTTAACTAATGATCCGTTGGAATCACTAAAAAAGATGCCTAGTTTGTCGGTTCTCTCTTTAAGCCACGCTTATGAAGGTCAAACTTTGCATTTTCAACCTGGAGGGTTTCAGAAACTAAGGAAGCTACATCTTTCAAATCTTGGGAACTTGAATTCGATCCTTATTGATGAAAGAGCTCTTCAGTCTTTGGGATATTTCGAGTTAACATGCCTCCGTGAACTCAAGACTGTACCCGTTGGCATTGAACATCTGGAGAAACTTATGTTTCTTGATCTGTTGTCTATGCCAACTGAATTTGAGGAGGAAATTGCTCCCATTGCAGAACGA 2721 0.3991 TITTHQNTERERERENYMEIGEIISSVMYILSILWETVKKLRDLPEEVAELRDELNFLLKVINDEDKVPEAREVDNQPYARKESLMRLRQEAFQTEDVIDEYVIHIEEKKPEGGWAAFPSKFVYYIKTLIPQLLIAYSIQERKSVVRKKRDDFRSLYPSEPSLNSSGENQDVTLHPRLDPLETEEKVVGLAGPTDTFKVWLTEEEVRRTVISVVGIPGVGKTTLAKHVFDQFHKCFDCHALITVSRSYKDVELLRDMLHGLCKDRRKYPPAMNRVQLIDAIKKCLRGKSYLVFFDDVWNEKFWDEIKNALIDDGENKSRIIITTRDEKVADYCKRSSYVREHKLEEPLSEEECLRLLHKKARYGSDGDCPEALKDISLEIVRKCKGLPLAIVVVGGLLAEVEESALEWRRFSEDLERNPGLNIITEIIGLSYDNLPNNLRSCLLYFGMYPEDCEIESDRLIRQWIAEGFVKPIAGQAVEEVAQDLLKGLIRRSLVQVSSFSMKGKVKKCRVHDSILEMIRKKAKDTRFCEYIDGHDQSGSSDERSTSDPRFVRRLTIAINESVRSFESSLIRSIIVIPGKQEELSSDHLVSKIPTDYMPLKVLDFEDSGLSCVPKKLGKLIHLRYLSFRGTQIKSLLKSIGKLLNLETLDVRQTKVCEMPKEITKLRKLRHLLTPNSASSSIQWKDIGGMPMLQKIPQVRMEDDGVAIREVGKLKKLRSLRVLYFGGKHENCLCSSINGMTKLEALRIESVDHSEVAVDLNITPSKLRKLFLDMKLERLPNWIPELSYLERLILRHSGLTNDPLESLKKMPSLSVLSLSHAYEGQTLHFQPGGFQKLRKLHLSNLGNLNSILIDERALQSLGYFELTCLRELKTVPVGIEHLEKLMFLDLLSMPTEFEEEIAPIAER 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02533 907 FunFam Probable disease resistance protein At1g63360 432 521 - -
Lapu6g02533 907 Gene3D - 437 523 IPR036388 -
Lapu6g02533 907 SUPERFAMILY L domain-like 512 896 - -
Lapu6g02533 907 Pfam NB-ARC domain 198 434 IPR002182 GO:0043531
Lapu6g02533 907 Gene3D Ribonuclease Inhibitor 564 701 IPR032675 -
Lapu6g02533 907 Gene3D - 169 340 IPR027417 -
Lapu6g02533 907 Gene3D Ribonuclease Inhibitor 708 900 IPR032675 -
Lapu6g02533 907 Gene3D - 25 136 - -
Lapu6g02533 907 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 446 IPR027417 -
Lapu6g02533 907 PANTHER DISEASE RESISTANCE PROTEIN RP 87 858 IPR044974 GO:0006952
Lapu6g02533 907 Pfam Rx N-terminal domain 30 111 IPR041118 -
Lapu6g02533 907 Gene3D - 347 436 IPR042197 -
Lapu6g02533 907 PRINTS Disease resistance protein signature 384 398 - -
Lapu6g02533 907 PRINTS Disease resistance protein signature 210 225 - -
Lapu6g02533 907 PRINTS Disease resistance protein signature 284 298 - -
Lapu6g02533 907 PRINTS Disease resistance protein signature 832 848 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02533 Lapu-Chr6 25336580 25339300 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02533 211 899 WRKY Transcription Factor Family AT5G45050 22.237 2.69e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02533 K13457 - gmx:100809266 899.427