Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02528 ATGCCAAGTGTTAAGCCTGATGCATCTGACAGAGACTCAGAACCATTTGTTGAAATTGATCCAACTAGAAGATATGGCAGATACAGTGAACTGCTGGGATGTGGTGCTGTGAAAAAGGTGTACAGGGCATTTGATCAAGAAGAGGGGATAGAGGTGGCTTGGAACCAAGTGAAACTGAGGAACTTCAGTGATGACCCCGCAATGGTGGAAAGGCTTTACTCTGAGGTGAGATTGCTCAGAAGCTTGACCAACAAAAACATCATATCCCTTTACAGTGTTTGGAGGGATGAGAAGCACAACACTTTGAACTTCATCACTGAGGTCTGCACCAGTGGGAATCTGAGGGAGTACAGGAAGAAACACAGGCATGTGTCCATGAGGGCCTTGAAAAAGTGGTCCAAGCAGATTTTGGAAGGGTTGAATTACTTGCATGTGCATGACCCTTGTATCATCCACAGAGACCTCAACTGCAGTAATGTGTTTGTCAATGGGAATACTGGCCAGGTTAAGATTGGTGACTTGGGTTTGGCAGCAATTGTGGGGAAGAGCCACTCTGCACATTCAGTTCTTGGGACACCAGAATTTATGGCACCTGAGTTGTATGATGAGGACTACACTGAAATGGTTGACATATACTCATTTGGAATGTGTGTGTTGGAGATGGTAACACTAGAGATTCCTTATAGTGAATGTGACAATGTTGCCAAGATATACAAGAAGGTATCATCAGGTGTGAGACCTCAAGCCTTGAGCAAGATCCAAGATCCTGAAGTGAAGGCCTTCATTGAGAGGTGTCTTGCTCAGCCAAGGGCTAGACCTTCTGCTGCAGAGTTGCTCAAGGACCCCTTCTTTGATTTGCTTGATTATGATGAAGATGATGATGGTGACTCTAATGCTTCATGA 903 0.4485 MPSVKPDASDRDSEPFVEIDPTRRYGRYSELLGCGAVKKVYRAFDQEEGIEVAWNQVKLRNFSDDPAMVERLYSEVRLLRSLTNKNIISLYSVWRDEKHNTLNFITEVCTSGNLREYRKKHRHVSMRALKKWSKQILEGLNYLHVHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKSHSAHSVLGTPEFMAPELYDEDYTEMVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSSGVRPQALSKIQDPEVKAFIERCLAQPRARPSAAELLKDPFFDLLDYDEDDDGDSNAS* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02528 300 SUPERFAMILY Protein kinase-like (PK-like) 19 285 IPR011009 -
Lapu6g02528 300 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 11 285 - -
Lapu6g02528 300 FunFam probable serine/threonine-protein kinase WNK9 109 289 - -
Lapu6g02528 300 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Lapu6g02528 300 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02528 300 FunFam Probable serine/threonine-protein kinase WNK1 11 107 - -
Lapu6g02528 300 PIRSF TyrPK_CSF1-R 117 281 - -
Lapu6g02528 300 PIRSF TyrPK_CSF1-R 23 128 - -
Lapu6g02528 300 CDD STKc_WNK 24 284 - -
Lapu6g02528 300 Gene3D Transferase(Phosphotransferase) domain 1 109 287 - -
Lapu6g02528 300 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02528 Lapu-Chr6 25253358 25255097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02528 10 285 MAP Kinase Kinase Kinase AT5G55560 84.420 0.0 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lapu6g02528 Pkinase 1.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02528 K08867 - gmx:100782039 548.51