Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02526 ATGGACGCCGGCGAAGCTCTCTCCGACGATCCGAATCGACCTGGGTCGAGGCCCAATTCCTCAGTCGATGCTACTCCGGCCGCCGCCGGCGCTAGGTACAAGCTCATGTCGCCGGCGAAGCTCCCGATCTCACGCTCGCCGTGCGTCACGATTCCGCCTGGGCTCAGTCCGACATCGTTTCTCGAGTCGCCGGTGCTGCTCTCCAACATGAAGGTGGAACCTTCACCGACTACAGGATCCCTTTTTATGCTTCATCAAACGGCTCATGCTTCTGTGAGTTCTGCTGCATCTGCATCATTTCCTGTAACCACTGTATGCTTCAATACCAATACTGTTGATGACCGAAAACCTAGCTTCTTTGAGTTTAAGCCGCAGAGTAGATCAAATATGGTTGCTGCAGACCCTGACAATCTTGCAAGTGAAAAATCTACTCAAATAGATGGTCAAGGAAAAGCTCAATCTTTTGATTCATCCCCATTAGTAAAAAGTGAGATAGCAGTCCCTTCGAATGAATTAAGTCTATCATCGCCTGTTCAAATGGCTAGCTCAGGAACTAATGCCCGTGTTGAAGGTGACTTGGATGAACTGAACCCTAGGAACAACTTAGCAACTGGGCTTCAAGCATCACAAGTTGAGAATAGAGGTAGTGGACTTTCTGTTGCAGCTGAGCGAGTATCTGATGATGGATACAACTGGAGAAAGTATGGGCAGAAACATGTTAAAGGAAGTGAATTTCCACGCAGTTATTACAAATGTACACATCCTAACTGTGAAGTTAAGAAACTATTTGAACGCTCTCATGATGGGCAAATCCCTGAGATAATTTATAAGGGAACACATGACCATCCAAAACCCCAACCAAATCGCCGTTACTCAACTGGAGCTATCATGACTGTGCAAGAAGAGAGATCTGATAAAGCTTCTTTCCGAGATGACAAAGGATCCAATATGTGTGGCCAGGTGTCTCACCCAGCTGAACCTGACAGTACTCCAGAGCTATCGCCTGCAGCAACAAATGATGGTGATCCAGAGGGTACAGGATTTTTGTCAAATCGGAATAATGATGAAGTTGATGATGATGATCTCTTCTCAAAGCGAAGAAAAATGGAGCTTGCAAATGCTGACATTACTCCGGTAGTTAAGCCTATTAGGGAGCCACGGGTGGTTGTACAAACTCTGAGTGAGGTTGATATATTGGATGATGGTTACCGCTGGCGCAAGTATGGGCAGAAGGTCGTGAGAGGCAATCCTAACCCTAGGAGTTATTACAAATGCACGAACACAGGGTGCCCCGTTAGAAAACACGTGGAGAGGGCATCTCATGATCCAAAAGCTGTGATAACCACATATGAGGGGAAACACAATCATGATGTGCCTACTGCAAGGAACAATAGTTGCCATGACATTGCTGGAGCAGCAAGTGCTGCTGGAGGACAGACAAGAATTAGGTCAGAAGAAAGTGATACCATCAGCCTTGACCTTGGTATGGGAATTAGCCCTGCTACTGAAAACACACCAAACAGTCAAGGGAGAATGATGCTTTCTGAATTTGGGGACAGTCAAGCTCACACCAGCAATTCCAATTTCAAGTTTGTCCACACTTCGACGGCGCCAGTGTACTTTGGTGTTCTAAATAACAACTCTAACCCATATGGCTCTAGAGAAAATCCAAGTGATAGTACATCTTTAAACCATTCTGCATATCCCTGCCCCCAGAACATGGGAAGAATACTAATGGGTCCTTAA 1746 0.4616 MDAGEALSDDPNRPGSRPNSSVDATPAAAGARYKLMSPAKLPISRSPCVTIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLFMLHQTAHASVSSAASASFPVTTVCFNTNTVDDRKPSFFEFKPQSRSNMVAADPDNLASEKSTQIDGQGKAQSFDSSPLVKSEIAVPSNELSLSSPVQMASSGTNARVEGDLDELNPRNNLATGLQASQVENRGSGLSVAAERVSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQIPEIIYKGTHDHPKPQPNRRYSTGAIMTVQEERSDKASFRDDKGSNMCGQVSHPAEPDSTPELSPAATNDGDPEGTGFLSNRNNDEVDDDDLFSKRRKMELANADITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNTGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARNNSCHDIAGAASAAGGQTRIRSEESDTISLDLGMGISPATENTPNSQGRMMLSEFGDSQAHTSNSNFKFVHTSTAPVYFGVLNNNSNPYGSRENPSDSTSLNHSAYPCPQNMGRILMGP* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02526 581 FunFam WRKY transcription factor 33 386 452 - -
Lapu6g02526 581 Gene3D WRKY domain 384 460 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu6g02526 581 Gene3D WRKY domain 218 286 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu6g02526 581 ProSiteProfiles WRKY domain profile. 221 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu6g02526 581 MobiDBLite consensus disorder prediction 138 159 - -
Lapu6g02526 581 MobiDBLite consensus disorder prediction 1 29 - -
Lapu6g02526 581 Pfam WRKY DNA -binding domain 400 456 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu6g02526 581 Pfam WRKY DNA -binding domain 227 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu6g02526 581 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 64 499 IPR044810 GO:0003700
Lapu6g02526 581 ProSiteProfiles WRKY domain profile. 394 459 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu6g02526 581 SUPERFAMILY WRKY DNA-binding domain 391 459 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu6g02526 581 MobiDBLite consensus disorder prediction 550 569 - -
Lapu6g02526 581 MobiDBLite consensus disorder prediction 301 359 - -
Lapu6g02526 581 SUPERFAMILY WRKY DNA-binding domain 223 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu6g02526 581 MobiDBLite consensus disorder prediction 550 581 - -
Lapu6g02526 581 FunFam WRKY transcription factor 215 286 - -
Lapu6g02526 581 SMART WRKY_cls 226 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu6g02526 581 SMART WRKY_cls 399 458 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02526 Lapu-Chr6 25228886 25234440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02526 36 581 WRKY Transcription Factor Family AT4G26640 56.835 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu6g02526 WRKY 1.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02526 - - gmx:100781491 1025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02526 6 25228886 25234440 Lapu6g02526 6 25228886 25234440 ECH
Lapu6g02526 6 25228886 25234440 Lapu6g02526 6 25228886 25234440 PCT