Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02522 ATGAACCCTGCTGATTGGGATCAAGAACTGAAAAAGTATCAGGATGTAATAGCTTCAGGTACCAAGAGTATGAAAATAAAGGCCATGTTGATGCTGGCGCGTTTTTCTAAGCATGCCCCTGAACATGTTTTAGCTCGCACCATACCCTTTCTCACTGAGATTCTTGGTCACAATGTTTCAAATGACTCTGCTCCTGCCCTGCAAGAGGCTGCTGCTTATTGCTTGAAGTGCATTGCTTGCAGGGGTGATGGTGCGTTGGCAGTTGAAATTGGTGGACATGGTGCCCCTCATTCGTTGATGAGGATGTTGCCTCACTCTGATGGAAGCTTGCAGAAGGTCCTCATAAAATGTTTGCTGGTTATTATTAGTTTTTGCAATGCAAGTAGGACAGTTGTTGCCACCAATGGTGGGGTGGAAATGATAATTGGTTTGTTGAGTTCTTGCACCAATGATACTAGGAGATATTTGTTGGAGATTTTGAGTGTGTTAGCATTGAGGAGGGATGTTAGGAAGGCTCTCACTAGACTAAGAGCTCTTCACTATGTTGTGGAGGCTGCTAGTTTTGGGAGCATGGTGTCTAGGGAAAGGGCTTGTCAAGCAATTGGGTTGCTTGGAGTTACGAGACAGACTCGGCGGATGCTTGTTGAATTGGGAGCAATTCCAGTGCTTGTGACTTTGTTTCGTGATGGAGAACACACCACGAAGCTTGTTGCTGGTAATTCTCTTGGTGTGATATCTGCTCATGTTGATTATATTAGGCCGGTTGCTCAAGCGGGGGCTATCCCCCTTTATGCTGAGCTTCTTGAAGGACCTGATCCTTCTGGGAAAGAGATAGCTGAGGATGTGTTTTGTATATTGGCTGTTGCTGAGGCTAATGCTGTTGAAATTGCTGGTCACTTGGTGAGGATTCTGAGAGAAGGTAATGATGAGGCAAAGGCTTCTGCAGCTGATGTGATGTGGGATCTGTCGGGTTACAAGCATTCAGTGTCTGTAGTCCGGGATTCAGGCGCAATTCCTATTCTTGTTGATCTTTTGGAGAGTGGGAGTGAAGATGTGAAGGTGAATGTTTCTGGGGCATTTGCTCAACTGACCTATGATGAAACTGATAGAATGTCACTTGCTGAGGCAGGGGCGATTCCAATTCTCATTGACTTGATGAATGATGTTGATGAGGTTGAGGAGCTAAGGGATAATGCTGCAGAGGCTCTTGTCAATTTTTATGAAGATCCATTGTATCATGATATAGTGTCGGATGCAATCAGTGTTCCTTCATTCAGAAGTATGCAGAATAGGTTAGTTCATATTCGTGCATCAAATGAGCACATGGCTAGATCCTTGAGAAGAATGAGTGTTGAGCAGCTCACATGGAACGCAGATCTTGTATAA 1386 0.4466 MNPADWDQELKKYQDVIASGTKSMKIKAMLMLARFSKHAPEHVLARTIPFLTEILGHNVSNDSAPALQEAAAYCLKCIACRGDGALAVEIGGHGAPHSLMRMLPHSDGSLQKVLIKCLLVIISFCNASRTVVATNGGVEMIIGLLSSCTNDTRRYLLEILSVLALRRDVRKALTRLRALHYVVEAASFGSMVSRERACQAIGLLGVTRQTRRMLVELGAIPVLVTLFRDGEHTTKLVAGNSLGVISAHVDYIRPVAQAGAIPLYAELLEGPDPSGKEIAEDVFCILAVAEANAVEIAGHLVRILREGNDEAKASAADVMWDLSGYKHSVSVVRDSGAIPILVDLLESGSEDVKVNVSGAFAQLTYDETDRMSLAEAGAIPILIDLMNDVDEVEELRDNAAEALVNFYEDPLYHDIVSDAISVPSFRSMQNRLVHIRASNEHMARSLRRMSVEQLTWNADLV* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02522 461 SMART arm_5 35 80 IPR000225 GO:0005515
Lapu6g02522 461 SMART arm_5 366 408 IPR000225 GO:0005515
Lapu6g02522 461 SMART arm_5 248 288 IPR000225 GO:0005515
Lapu6g02522 461 SMART arm_5 325 365 IPR000225 GO:0005515
Lapu6g02522 461 SMART arm_5 125 165 IPR000225 GO:0005515
Lapu6g02522 461 SMART arm_5 207 247 IPR000225 GO:0005515
Lapu6g02522 461 Gene3D - 251 430 IPR011989 -
Lapu6g02522 461 Pfam Armadillo/beta-catenin-like repeat 330 364 IPR000225 GO:0005515
Lapu6g02522 461 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 377 406 IPR000225 GO:0005515
Lapu6g02522 461 Coils Coil 382 402 - -
Lapu6g02522 461 Gene3D - 5 250 IPR011989 -
Lapu6g02522 461 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 336 378 IPR000225 GO:0005515
Lapu6g02522 461 SUPERFAMILY ARM repeat 61 408 IPR016024 -
Lapu6g02522 461 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 4 ARMC4 300 419 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02522 207 423 U-box Gene Family AT2G23140 27.679 1.19e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02522 - - gmx:100819735 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02522 6 25183057 25185239 Lapu6g02522 6 25183057 25185239 ECH