Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02521 ATGGCTAAGCTTGCCCCTCTTGAAGAGCCTCTTTTGAAGGGCGACTCTAGTGCAATCAACAGTTCTGATCCCAGTAAGACTAGAGGAAATGAAAATTCAAAACGATATTCAAATGCAGGATTTTTCAGTATTCTTACTTTCTCATGGATCAGTCCATTAATAACTCTAGGAAATCAGAAGACTTTAAACCATGAGGACCTCCCACTTCTTGCCACTCATGACAGTGCCTATGGGACTTATCCAACATTTATAAATAAACTTGAGTCGGAGTGTGGTGTTCGAAATGTGACCACTCTTAAGCTGGTGAAGGTGTTATTCCTGTCAACATGGCAAGGGATCTTTTTATCAGGTTTATTTGCATTCCTTTATACGTGTGCTTCTTACGTTGGACCCTATCTTATTGACATCCTTGTTCAATACCTCAATGGGGAATACAAGTTTAAAAATGAAGGCTATGTTTTGGCTGCGACATTTGTTGCTGCAAAGCTTGTGGAGTGTCTTTCACAGAGGCACTGGATGTTTAGGTTCCAGCAGGTTGGGGTTAGGATGCAATCGATGCTGGTGGCAATGATCTATGCAAAAGGTTTGGCTCTTTCATGTCAATCAAAGGAGGTTCGTAGTACTGGGGAAATCATCAACTTATTGACTGTCGATGCTGAAAGAATTGGTGAATTTTGTTGGTACATGCATGATCCATGGATGTGTGTTTTGCAACTTGCTTTGGCCCTGTTAATTCTCTATAGAAGTGTAGGTGTTGCTTCAATAGCTGCTCTTGCTGCCACTGTAATTGTTATGTTGCTAAACCATCCTGTGGCATCATTGCAAGGAAAGTTCCAAGGCAAGATAATGGAGTTCAAAGATAAAAGAATGAAGGCTACATCTGAGATTCTTAAGAATATGAGGATTCTCAAACTGCAAGCATGGGAGATGAAGTTCTTATCAAAGATTATTCAACTTAGAAAGAGTGAGGAGACATGGCTAAGGAAATTTCTAGCTGGTACAGCAACTATTCGATTCTTGTTCCACAACGCCCCAACTTTTATCGCAGTTGTTACATTTGGTGCTTGTGTTCTTGTGGGGATACCACTTGAATCAGGGAAGGTCTTGTCTGCACTTGCAACATTCAGAATTCTTCAAATGCCCATCTACAGTCTTCCTGACACAATTTCTATGATTGCGCAAACTAAAGTTTCTCTGGATAGAATTGCATCATTTCTTCGACTAGATGAGTTGCAGACTGATATAGTACAGAAGCTTTCCTGGGGCAGTTCTGATAAGGCAATTGAATTAGTGGATGGAAACTTCTCATGGGATTTATCTTCCCCTAATCCAACATTGAAAAACATAAATCTCAATGTTTCTCATGGTATGAGAGTAGCTATATGTGGTACTGTTGGATCAGGAAAGTCTAGTTTACTTTCTTGTATTATAGGGGAAGTACCAAAAATATCTGGGACATTGAAAATATGTGGAACAAAGGCTTATGTTTCTCAATCGCCATGGATACAGAGTGGCAAGATAGAAGAAAACATATTGTTTGGTAAAAAGATGGACAGGGAAAAGTATGAGAAGGTGCTAGAAGCATGTTCCTTGACGAAAGACCTTGAGGTTCTACCATTTGGTGATCAGACCATTATTGGGGAGAAGGGAATCAATTTGAGTGGTGGACAGAAGCAAAGAGTGCAAATAGCCCGTGCTCTATACCAAGATGTTGATTTATATCTTTTTGATGATCCCTTCAGTGCCGTTGATGCTCATACAGGATCCCATCTCTTTAAGGAGTGCTTGCTTGGCCTTTTAAAATCAAAAACTGTGATATACGTAACACATCAAGTAGAGTTTTTACCTGATGCTGATCTAATATTGGTCATGAGAGAAGGAAGGATAACTCAATCAGGAAAATACAATGACATTCTCAAGACAGGCACTGATTTTATGGAACTTGTAGGTGCACACAGAGCAGCTTTGTCTTCAATTAAGTCCTTAGCGAGAAGACCAACATTTAAAACATCAAGTACCACCAAGGAGAAAACAAATTCATTCAGTGATTTTGAACTTGAGCAAAATGTTGAAAACATATATGGTCAAAATGATGCGCCAAACGACGCAGTTGAACCCAAAGGACAACTTGTTCAAGAAGAAGAACGAGAAAAAGGTAGAGTGGGGTTTAAAGTGTACTGGAAATACATCACAACAGCATATGGAGGGGCTCTTGTGCCCTTCATATTACTTTCACAGACACTCACTGTGGGCTTTCAGATTGCAAGCAATTATTGGATGACTCTAGCAACTCCTGTTTCAGCAACAGCACAACCGGATATTGGAAGCTTTACACTTATGGTTGTCTATGTTGCTTTGGGAATTGGAAGTTCCATTTTCACCTTTGCCAGATCATTTCTTGCTGTGATAGCTGGATACAAGACCGCCAGTGTGCTCTTCAATAAAATGCATTTGCGTATTTTCCGAGCCCCAATATCATTTTTTGATGCCACCCCAAGTGGTCGAATCCTCAATAGAGCTTCAATTGACCAAAGCTCACTAGATATGTACATTGCAAATGTATTATGGGCAATTACCCTCAATCTGATTCAACTCTTGGGAAATGTTGCTGTGATGTCTCAAGCTGCATGGCAGGTTTTCATAGTATTGATTCCTGTCATGGCAGCTAGCATATGGTACCAGCGGTACTATTCTGCATCTGCAAGAGAATTGGCACGATTGGTTGGTACATGTCAAGCTCCAGTTATACAACATTTTTCTGAAACAATTTCTGGATCAACAACCATAAGAAGTTTTGAACAAGAATCAAGATTCAATGACATAAATATGAAATTGATAGACAGATATTCCCAACCCAAATTATACAGTGCAACTGCAATTGAATGGCTGAATTTCCGATTGGATATTTTATCCACTCTCACATTTGCCTTCTGTTTGGTATTCTTGGTATCTTTCCCAAATTCAGTGACTGCTCCTGGTATTGCGGGATTGGCTGTGACATATGGACTTAATCTAAATTCTGTGCAAACTAAAGTAATCTGGTTTCTTTGCGACATGGAGAATAAAATTATATCTGTAGAAAGAATACTCCAGTACACGTCCCTCCCAAGTGAAGCTCCTCTGGTGATTAAAGATAACCAGCCGGATTATTCTTGGCCATCATTTGGAGAGGTTCATATCTGGAATTTGCAGGTTCGATATGCTTCTCACTTGCCTATTGTTTTACGAGGTCTTACTTGCACTTTTACTGCGGGATCAAAAACTGGTATTGTGGGAAGAACAGGAAGTGGAAAATCAACTCTTGTGCAAACACTTCTCCGACTTATTGAACCTATGGCTGGAAAAATATTGATAGATAACATTAACATATCTTTGATTGGCATTCATGATTTGCGGTCTAGACTCAGCATTATTCCTCAAGATCCAACAATGTTTGAAGGGACTGTAAGAACGAACCTGGATCCACTGGAAGAGTACACAGATGAACAGATTTGGGAGGCTCTAGATATGTGCCAACTTGGAGATGATGTAAGGAAAAAGGAAGGGAAGCTGGACTCCATAGTTACTGAGAATGGAGAAAATTGGAGTATGGGTCAAAGGCAATTGGTCTGCCTAGGCCGTGTTCTACTTAAGAAAAACAAGATATTGGTGCTTGATGAGGCTACAGCATCAGTTGATACATCCACAGATAATATTATTCAGCAAACAGTTAAGCAACATTTTTCAGAATGCACAGTCATTACCATTGCTCATAGGATAACTTCTATCATCGACAGTGACATGGTTCTATTTTTAAATCAAGGGTTGATTGAGGAATATGATTCACCTAAGAAACTTCTTAAGAACAAATCTTCATCTCTAGCTCAACTAGTTGCGGAATACACAAAGAGGTCAAACTCTGGTTTTGGAAATTAA 3915 0.3962 MAKLAPLEEPLLKGDSSAINSSDPSKTRGNENSKRYSNAGFFSILTFSWISPLITLGNQKTLNHEDLPLLATHDSAYGTYPTFINKLESECGVRNVTTLKLVKVLFLSTWQGIFLSGLFAFLYTCASYVGPYLIDILVQYLNGEYKFKNEGYVLAATFVAAKLVECLSQRHWMFRFQQVGVRMQSMLVAMIYAKGLALSCQSKEVRSTGEIINLLTVDAERIGEFCWYMHDPWMCVLQLALALLILYRSVGVASIAALAATVIVMLLNHPVASLQGKFQGKIMEFKDKRMKATSEILKNMRILKLQAWEMKFLSKIIQLRKSEETWLRKFLAGTATIRFLFHNAPTFIAVVTFGACVLVGIPLESGKVLSALATFRILQMPIYSLPDTISMIAQTKVSLDRIASFLRLDELQTDIVQKLSWGSSDKAIELVDGNFSWDLSSPNPTLKNINLNVSHGMRVAICGTVGSGKSSLLSCIIGEVPKISGTLKICGTKAYVSQSPWIQSGKIEENILFGKKMDREKYEKVLEACSLTKDLEVLPFGDQTIIGEKGINLSGGQKQRVQIARALYQDVDLYLFDDPFSAVDAHTGSHLFKECLLGLLKSKTVIYVTHQVEFLPDADLILVMREGRITQSGKYNDILKTGTDFMELVGAHRAALSSIKSLARRPTFKTSSTTKEKTNSFSDFELEQNVENIYGQNDAPNDAVEPKGQLVQEEEREKGRVGFKVYWKYITTAYGGALVPFILLSQTLTVGFQIASNYWMTLATPVSATAQPDIGSFTLMVVYVALGIGSSIFTFARSFLAVIAGYKTASVLFNKMHLRIFRAPISFFDATPSGRILNRASIDQSSLDMYIANVLWAITLNLIQLLGNVAVMSQAAWQVFIVLIPVMAASIWYQRYYSASARELARLVGTCQAPVIQHFSETISGSTTIRSFEQESRFNDINMKLIDRYSQPKLYSATAIEWLNFRLDILSTLTFAFCLVFLVSFPNSVTAPGIAGLAVTYGLNLNSVQTKVIWFLCDMENKIISVERILQYTSLPSEAPLVIKDNQPDYSWPSFGEVHIWNLQVRYASHLPIVLRGLTCTFTAGSKTGIVGRTGSGKSTLVQTLLRLIEPMAGKILIDNINISLIGIHDLRSRLSIIPQDPTMFEGTVRTNLDPLEEYTDEQIWEALDMCQLGDDVRKKEGKLDSIVTENGENWSMGQRQLVCLGRVLLKKNKILVLDEATASVDTSTDNIIQQTVKQHFSECTVITIAHRITSIIDSDMVLFLNQGLIEEYDSPKKLLKNKSSSLAQLVAEYTKRSNSGFGN* 1305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02521 1304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1049 1284 IPR027417 -
Lapu6g02521 1304 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1058 1292 IPR003439 GO:0005524
Lapu6g02521 1304 Pfam ABC transporter transmembrane region 741 983 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu6g02521 1304 Pfam ABC transporter transmembrane region 113 381 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu6g02521 1304 Pfam ABC transporter 1076 1223 IPR003439 GO:0005524
Lapu6g02521 1304 Gene3D - 407 668 IPR027417 -
Lapu6g02521 1304 MobiDBLite consensus disorder prediction 15 32 - -
Lapu6g02521 1304 CDD ABC_6TM_ABCC_D2 739 1033 IPR044726 GO:0140359
Lapu6g02521 1304 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 37 1294 - -
Lapu6g02521 1304 SUPERFAMILY ABC transporter transmembrane region 110 407 IPR036640 GO:0005524|GO:0016020
Lapu6g02521 1304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 425 650 IPR027417 -
Lapu6g02521 1304 SUPERFAMILY ABC transporter transmembrane region 739 1040 IPR036640 GO:0005524|GO:0016020
Lapu6g02521 1304 FunFam ABC transporter C family member 5 703 1039 - -
Lapu6g02521 1304 FunFam ABC transporter C family member 3 1041 1293 - -
Lapu6g02521 1304 CDD ABC_6TM_ABCC_D1 115 402 IPR044746 GO:0140359
Lapu6g02521 1304 FunFam ABC transporter C family member 10 97 410 - -
Lapu6g02521 1304 CDD ABCC_MRP_domain2 1056 1276 - -
Lapu6g02521 1304 MobiDBLite consensus disorder prediction 1 32 - -
Lapu6g02521 1304 Pfam ABC transporter 446 580 IPR003439 GO:0005524
Lapu6g02521 1304 Gene3D - 1041 1294 IPR027417 -
Lapu6g02521 1304 CDD ABCC_MRP_domain1 428 628 - -
Lapu6g02521 1304 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 428 651 IPR003439 GO:0005524
Lapu6g02521 1304 ProSitePatterns ABC transporters family signature. 553 567 IPR017871 GO:0005524|GO:0016887
Lapu6g02521 1304 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 114 394 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu6g02521 1304 FunFam ABC transporter C family member 5 413 660 - -
Lapu6g02521 1304 Gene3D ABC transporter type 1, transmembrane domain 703 1039 IPR036640 GO:0005524|GO:0016020
Lapu6g02521 1304 Gene3D ABC transporter type 1, transmembrane domain 90 406 IPR036640 GO:0005524|GO:0016020
Lapu6g02521 1304 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 741 1021 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu6g02521 1304 SMART AAA_5 455 628 IPR003593 GO:0016887
Lapu6g02521 1304 SMART AAA_5 1084 1269 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02521 Lapu-Chr6 25174792 25180761 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02521 428 674 Calmodulin-binding Proteins AT2G36910 28.839 3.02e-26 115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02520 6 25153592 25160291 Lapu6g02521 6 25174792 25180761 PCT