Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02473 ATGGAAATTGGGAGAGAGAATGAGATTGAGGACATGTCCATGTCACCCCCACTAGTTGGTTCCATCATTAACAATGACTTTTGTCACCACAAAGAGTTCATGTCTCAGAATAAGTACTCAGAGATTGACATAGATATTGAAGATTCCAATTTCGAACAAAATCACCCCCTCCCCATATTTCTCAAGTTTGAAGATGTGGAGTATAAGGTGAGAAATAGCCAAGCAGGCTCAGGTAACCTTATGAAGAGAGTGGTGTCAAAGGCAACCACAAAACTCACAGTGGAAGAAGATAGATACAAGAAAATTTTGAAGGGCATCACAGGAAGCATAGGCCCTGGTGAAATTCTTGCCTTAATGGGTCCTTCTGGCAGTGGGAAGACAACCTTGTTGAGAGTTATAGGAGGGAGACTAGTTGACAATGTAAAGGGAAAAGTAACTTATAATGATGTTCGTTTCACTCCAGCTCTCAAGAGGAGGATTGGGTTTGTGACACAAGAGGATGTGCTTTTCCCACAATTAACAGTTGAAGAAACTTTAGTCTTCTCTGCACTTTTAAGGCTACCAAGCAATATGAGCAAGCAGCAAAAGTATGCAAAAGTAGATACCACCATCAAGGAGCTAGGCCTAGAAAGATGTCGCCACACAAAAATAGCTGGAGGATATCTCAAAGGCATATCAGGAGGAGAAAGGAAGAGAACCTGCATAGGCTATGAAATTCTTGTTGATCCTTCACTGTTGCTACTTGATGAACCAACTTCTGGCCTTGATTCCTCCTCAGCAAATAAACTTCTTCTCACTCTTCAAGGACTTGCCAAGGCTGGAAGGACCATAATCACAACAATACACCAGCCGTCGAGTAGAATCTTTCACATGTTTGACAAACTACTTCTGATATCAGAAGGCTATCCTGTTTACTATGGAAAGTCTAAGGAAACAATGGAGTACTTTTCATCTTTGAGATTCACCCCTCAAATACCGATGAATCCTGCAGAGTTCTTGCTTGACTTGGCAACTGGACAAGTGAATGACATAAGTGTTCCAACAGATATCTTTCAAGATCAAGAATCTTCTGACCCTTCAAAAGTTGTTATTGAATATCTACAGCTCAAATACAAATCTCTACTGGAGCCAAAAGAAAAAGAAGAGAACCATAGAGTAGCAAGCACACCAGAACACCTTCAACAAGCCATTCAGGTTAAGATGGAGTGGACATCGAGTTGGTTGGACCAATTTGTGATTCTTTCCAGGAGAACATACAGAGCAAGAAGAAAGGACTACTTTGATAAGCTAAGACTAGTTCAAGCACTTGGAATTGCACTTTTGTTGGGGCTACTTTGGTGGAAATCTTCAACCAATACTGAAGCTGGACTCAGAGACCAGGTTGGTTTAGCATTCTACATCTGTATATTCTGGACATCTTCATGCATTTTTGGAGCAGTCTATGTGTTTCCTTTTGAGAAGTACTACTTGATAAAAGAAAGTAAAGCTGACATGTATAGATTAAGTGTATACTATGCATGCAGCACTCTATGTGACATGGTGGCACACGTTTTCTATCCTACTTTTTTCATGCTTGTCTTGTACTTCATGGCTGGCTTTAACAGAGCTGTTGCTTCCTTCTTCTTGACACTATTAACTATTCTGTTAATAGCTATAACAAGTCAAGGGGCAGGAGAAATGCTAGGAGCTGCAATTATGAGTGTTAAAAGAGGAGGTACTGCTGCTTCTTTGATACTAATGCTATTCCTTCTCACAGGAGGCTACTATGTCCAGCACATACCAAAGTTCATACGATGGTTGAAGTATTTATCCTTCATGTACTATGGTTTTAGGCTTCTCCTCAAAGTGCAATATTCTGGAGACCAACTATATGATTGTGAAAGCAAGGGAGGGTGCAGAACCCTGCAGAGTTCACCAACATTTGACATTGTAAACTTGAAGGGTGGATTGAAAGAAGTATGGATTCTGCTAGCCATGGCCTTAATCTTTCGGTTGTTAGCTTACTTGTGTCTGCGGCTAAGAATTGATAGAAAAAACTGA 2040 0.4059 MEIGRENEIEDMSMSPPLVGSIINNDFCHHKEFMSQNKYSEIDIDIEDSNFEQNHPLPIFLKFEDVEYKVRNSQAGSGNLMKRVVSKATTKLTVEEDRYKKILKGITGSIGPGEILALMGPSGSGKTTLLRVIGGRLVDNVKGKVTYNDVRFTPALKRRIGFVTQEDVLFPQLTVEETLVFSALLRLPSNMSKQQKYAKVDTTIKELGLERCRHTKIAGGYLKGISGGERKRTCIGYEILVDPSLLLLDEPTSGLDSSSANKLLLTLQGLAKAGRTIITTIHQPSSRIFHMFDKLLLISEGYPVYYGKSKETMEYFSSLRFTPQIPMNPAEFLLDLATGQVNDISVPTDIFQDQESSDPSKVVIEYLQLKYKSLLEPKEKEENHRVASTPEHLQQAIQVKMEWTSSWLDQFVILSRRTYRARRKDYFDKLRLVQALGIALLLGLLWWKSSTNTEAGLRDQVGLAFYICIFWTSSCIFGAVYVFPFEKYYLIKESKADMYRLSVYYACSTLCDMVAHVFYPTFFMLVLYFMAGFNRAVASFFLTLLTILLIAITSQGAGEMLGAAIMSVKRGGTAASLILMLFLLTGGYYVQHIPKFIRWLKYLSFMYYGFRLLLKVQYSGDQLYDCESKGGCRTLQSSPTFDIVNLKGGLKEVWILLAMALIFRLLAYLCLRLRIDRKN* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02473 679 Pfam ABC transporter 103 253 IPR003439 GO:0005524
Lapu6g02473 679 Pfam ABC-2 type transporter 410 618 IPR013525 GO:0016020|GO:0140359
Lapu6g02473 679 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 48 668 - -
Lapu6g02473 679 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 61 325 IPR003439 GO:0005524
Lapu6g02473 679 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 318 IPR027417 -
Lapu6g02473 679 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 144 IPR027417 -
Lapu6g02473 679 SMART AAA_5 112 303 IPR003593 GO:0016887
Lapu6g02473 679 Gene3D - 88 320 IPR027417 -
Lapu6g02473 679 FunFam ABC transporter G family member 22 90 319 - -
Lapu6g02473 679 CDD ABCG_EPDR 99 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02473 Lapu-Chr6 24638463 24642635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02473 101 286 Calmodulin-binding Proteins AT2G36910 30.622 7.40e-13 70.5