Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02471 ATGGCTTCATTTCCTTCAAATTCTGCATCTGAACACAGCATGGCCAGTGCACAAAACAGCAACCCTCAAGCTTCCTCACCTTCTTTCATGACTAGAGTGGCCATGAGAATATCTAGATCAAGATGGTTCACCTTCTTAAGAAGAGTATTCCATTACCAAAATGGACCAAGATCAGATCTTGGCTCCAACCCTTTCAATTCTAGCACTTGGATGATGCTGGAGTTTATTGCTTTACTGGTCCAGATAACAAGCACAACACTCACTTTGGCCATTTCAAAGAGTGAGAAGCCTATTTGGCCTATGAGGGTGTGGATAGCAGGTTATGACATTGGCTGTGTCCTTAATCTGCTGCTACTCTTTGGCCGCTACTATCAACTCCATGTGACTCGAGGAGGTGTTCTTAACCTTTCTGATTTGGAGCAGCAGAGAAACAATGAAGAATCAAGTGTGTTCAGAGGCTCACATTTGATGGACAAATGCAGAAGTTCACTAGAGCTTTTCTTTGCCATATGGTTTGTGATGGGCAATGTTTGGGCCTTTGACTCACGTTTTGGGTCATTTCAACAAGCTCCAAAACTGCAGGTGCTATGCATGATCCTACTTGCTTGGAATGCAATATGCTACTCTTTCCCTTTTCTGCTATTTTTGCTCTTATGTTGTTGTGTGCCCCTGATGAGCACCCTCCTTGGATACAACATGAGCATGGGCTCCTCTGCCAGAGGGGCATCAGATGATCAAATATCACAACTCCCTAGTTGGAGATACAAAGGAGCTCACACCAACTTGGACTTTGACAATGACTCTCAAACCACTCAAAGATTGATCAATGATGATCCAGAATGCTGCATTTGCTTGGCCAAGTACAAAGACAAAGAAGAAGTTAGACAATTACCTTGTTCCCATTTGTTCCACCTAAAATGTGTGGATCAATGGCTAAGAATTATATCATGTTGCCCCCTTTGTAAACAAGGATTACAAAGGTAG 984 0.4289 MASFPSNSASEHSMASAQNSNPQASSPSFMTRVAMRISRSRWFTFLRRVFHYQNGPRSDLGSNPFNSSTWMMLEFIALLVQITSTTLTLAISKSEKPIWPMRVWIAGYDIGCVLNLLLLFGRYYQLHVTRGGVLNLSDLEQQRNNEESSVFRGSHLMDKCRSSLELFFAIWFVMGNVWAFDSRFGSFQQAPKLQVLCMILLAWNAICYSFPFLLFLLLCCCVPLMSTLLGYNMSMGSSARGASDDQISQLPSWRYKGAHTNLDFDNDSQTTQRLINDDPECCICLAKYKDKEEVRQLPCSHLFHLKCVDQWLRIISCCPLCKQGLQR* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02471 327 SMART ring_2 281 321 IPR001841 -
Lapu6g02471 327 MobiDBLite consensus disorder prediction 1 27 - -
Lapu6g02471 327 SUPERFAMILY RING/U-box 271 325 - -
Lapu6g02471 327 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 10 325 - -
Lapu6g02471 327 Pfam RING-like zinc finger 280 308 IPR001841 -
Lapu6g02471 327 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 231 326 IPR013083 -
Lapu6g02471 327 ProSiteProfiles Zinc finger RING-type profile. 281 322 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02471 Lapu-Chr6 24624344 24627952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02471 29 325 C3H Transcription Factor Family AT4G26580 68.350 8.25e-145 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02471 - - gmx:100818715 600.127