Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02456 ATGAGCGATTCTGCATACAGAGTCGAAACCACCCCACGTCTTGCTCAATGGAGAATCGAAAACTTGGCTTCTTGCACTTACCGAAAATCCGATCCTTTCAGGATCGGCAAGTGGAATTGGCATTTGTCGGTGGAGAAGAGCAGGGTTTTGTTTGTTAAATTGTTTCCAGAAATATCCAATCTTACAAGAGACAACCCTCCAATTGCATCTTTCATCGTTCGGGTTGTTAGTTCTGTTGGAGATCGCAAGGCCATCACACACCCAGAAATAAAGGACAAAGTGTTAAAGAACAACGAGGATTTTGTTTGGGCAATTGAGGTTCCACTAACTGGGAAATTCATTATTGACGTTGAGTTTCTAGATTTGAAGACTGCATCCCCAAACGGTGGAGAACCTTGTTCCATTTGGGCAGAAGGTTTTACTCAGCAAAGATCAAATGCAAATGCCATAGAATCTCTTGGCAGAATGCTAACTGAAGGAATCCACACTGACATCACCATCAATGCTTCTGATGGAAGTATAGGAGCTCATAGAGCTGTTCTTGCCGCTAGATCTCCTGTATTTCGCAGCATGTTCTCACATAATCTTCAGGAGAAAGAGTTGTCAACCATAAACATCTCAGATATGTCACTTGATTCATGCCAGGCCTTTCTCAATTATCTTTATGGAATCATCAAACATGAAGAGTTTCTGATTCATAGGTTGGCCCTTCTTCATGCAGCCGACAAGTATGACATATCTGATCTGAGAGATGCATGCCATGAGAGTCTTCTTGAAGACATTGACACAAAAAATGTACTTGAGAGGCTCCAAAATGCATCTCTATATCAGTTGATGAAACTGAAGATGAGTTGCATCCGGTATCTTGTGAAGTTTGGCAAAATCTATGAAATTCGGGATGATTTCAATACCTTCTTGCATAATGCAGATAGGGATCTGATTGCTGAAGTCTTCCACGAAGTTCTTGATGCTTGGAAAGGATTCTGA 987 0.4144 MSDSAYRVETTPRLAQWRIENLASCTYRKSDPFRIGKWNWHLSVEKSRVLFVKLFPEISNLTRDNPPIASFIVRVVSSVGDRKAITHPEIKDKVLKNNEDFVWAIEVPLTGKFIIDVEFLDLKTASPNGGEPCSIWAEGFTQQRSNANAIESLGRMLTEGIHTDITINASDGSIGAHRAVLAARSPVFRSMFSHNLQEKELSTINISDMSLDSCQAFLNYLYGIIKHEEFLIHRLALLHAADKYDISDLRDACHESLLEDIDTKNVLERLQNASLYQLMKLKMSCIRYLVKFGKIYEIRDDFNTFLHNADRDLIAEVFHEVLDAWKGF* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02456 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Lapu6g02456 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Lapu6g02456 328 SUPERFAMILY POZ domain 147 259 IPR011333 -
Lapu6g02456 328 PANTHER OS08G0495500 PROTEIN-RELATED 5 327 IPR044714 -
Lapu6g02456 328 Pfam BTB/POZ domain 156 259 IPR000210 GO:0005515
Lapu6g02456 328 Gene3D Potassium Channel Kv1.1; Chain A 140 291 IPR011333 -
Lapu6g02456 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02456 Lapu-Chr6 24461537 24464851 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lapu6g02456 BTB 3.5e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02456 K10523 - gmx:100790186 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02456 6 24461537 24464851 Lapu6g02456 6 24461537 24464851 ECH