Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02448 ATGAAGACGACGTTGAATCTTGCCGCCGGAGATTTTCCGCTCCATTTTTCTTCATCAGCCTGCTCTTACCGCCGGACCTCTGTACGCGCCGTTGCAGTGGAAGCGGTCCAGGTGCGCTTGCCAAGGCTGAGCCTCTACGAGGTGCTGCGAATCCAGCGTGACGCGTCGCCGACGGAGATCAAGTCGGCTTACCGGAGCCTTGCGAAGCTCTACCATCCCGACGCGGTGGTGCGGCGTTCGACGGAGGAAGACGGAGCAGGCGAAGCCGCCGACGGACACTTTATCCAGATCCGAAGCGCTTACGAGACGCTATCGGATCCATCGGCAAGGGCGATGTACGATCTTACGCTGACGGCGATGCACAGCGGAAAATACCGCCGGTTTCCGATTCCTCTTAGTCGGAACCACTCGTCGACGTTTTACGCGACGCGGAGATGGGAAACGGACCAATGCTGGTAG 459 0.5926 MKTTLNLAAGDFPLHFSSSACSYRRTSVRAVAVEAVQVRLPRLSLYEVLRIQRDASPTEIKSAYRSLAKLYHPDAVVRRSTEEDGAGEAADGHFIQIRSAYETLSDPSARAMYDLTLTAMHSGKYRRFPIPLSRNHSSTFYATRRWETDQCW* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02448 152 Gene3D DnaJ domain 32 130 IPR036869 -
Lapu6g02448 152 PRINTS DnaJ domain signature 46 64 IPR001623 -
Lapu6g02448 152 PRINTS DnaJ domain signature 89 109 IPR001623 -
Lapu6g02448 152 PRINTS DnaJ domain signature 64 79 IPR001623 -
Lapu6g02448 152 ProSitePatterns Nt-dnaJ domain signature. 94 113 IPR018253 -
Lapu6g02448 152 Pfam DnaJ domain 45 114 IPR001623 -
Lapu6g02448 152 CDD DnaJ 46 106 IPR001623 -
Lapu6g02448 152 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 16 152 - -
Lapu6g02448 152 SMART dnaj_3 43 109 IPR001623 -
Lapu6g02448 152 SUPERFAMILY Chaperone J-domain 35 119 IPR036869 -
Lapu6g02448 152 ProSiteProfiles dnaJ domain profile. 44 117 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02448 Lapu-Chr6 24392745 24393789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02448 46 114 C2H2 Transcription Factor Family AT1G74250 47.143 4.20e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02448 - - var:108320973 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02448 6 24392745 24393789 Lapu6g02448 6 24392745 24393789 ECH