Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02406 ATGGTGCAAATGGATACACTCCCTCTGCTCCTAACCCTAGCTTCTGTTCTTTTATCCACATATTTTCTTTGGTTTTATTTCTTGGCTCGAACCCTAACGGGTCCAAAAATGTGGCCCATGCTTGGCAGCGTTCCAGAATTATTGGTGAACCGGAATAGGGTTCATGACTGGATGACTTCAAACCTACGCCAAACAGAAGGTGGTTCAGGTTCAGCCACTTACCAAACATGCACTCTCTGTCTCCCTTTCTTTGCCCGCAAGCAGGGATTCTTTACCGTCACTAGCTGTCCTAGAAACATCGAACACATTCTCCGAACAAGGTTCGACAACTATCCTAAAGGGCCGCGCTGGCAGACGGCGTTCCACGACCTCCTAGGGCAGGGAATTTTCAACAGCGACGGTGAAACGTGGCTCATGCAGCGGAAAACCGCCGCGCTCGAGTTCACCACCCGAACCCTAAGACAAGCCATGGCTCGGTGGGTGAACCGGACCATAAAAAACAGGCTATGGTGCATTCTGGACAAAGCTGCCAAGGAAAAGGTATCAGTGGATCTGCAGGACCTTCTTCTACGTTTAACCTTTGATAACATCTGTGGACTCACCTTTGGAAAAGACCCCGAAACTCTCTCACCGGATCTCCGTGAAAACCCCTTCACTGTTGCCTTTGACACTGCCACTGAAATCACCTTGCAAAGACTTTTGTACCCTGGCATAATATGGAGATTCGAGAAGCTTCTTGGCATTGGTAAAGAGAAGAAATTGGAGCAGAGTTTGAAGATCGTCGAAACTTACATGAACGACGCCGTTTCAGCTCGCGAGAAATCGCCTTCCGACGACTTGATATCGAGGTTCATGAAGAAGCGCGACGCCGCCGGAAAGCCCTTGAGCTCCACCGCACTGCGTCAGATCGCGCTCAACTTCGTCCTCGCCGGCAGGGACACGTCGTCGGTGGCGCTCAGCTGGTTCTTCTGGCTCGTCATGAACCACCCCGCCGTGGAGGACAAGATACTCGCCGAACTTACGGCGGTGCTTCATTCCACTCGTGGCGACGACCGGCGGAGGTGGACGGAGGAGGCGGTGGACTTCGAGGAGGCGGAGAGGCTGGTTTACTTGAAAGCGGCGCTCGCGGAAACGCTGCGTTTGTATCCGTCGGTGCCGGAGGATTTCAAGCACGCGGTGGCGGATGACGTGTTGCCGGATGGCACGGTGATTCCGGCTGGTTCGACAGTGACGTATTCGATTTACGCGATGGGGAGAATGAAGAGTGTGTGGGGAGAGGATTGCATGGAGTTTAAACCGGAGCGATTTTTATCGGTTCAGGGAGACCGGTTCGAATCGCCAAAAGACGGTTACAAGTTCGTTGCGTTTAACGCTGGACCGAGAACCTGCTTGGGCAAGGACTTGGCTTACCTGCAGATGAAATCTGTGGCTTCAGCTGTTCTTCTGCGTTACCGGCTGTCGCCGGTTCCCGGTCACCGAGTGCAGCAGAAGATGTCGCTCACTCTCTTCATGAAGAACGGGCTTCGTGTGTTCTTGCAGCCTCGTCAGCTTCAACCACATACTGCCACGTCAGCATAA 1578 0.5304 MVQMDTLPLLLTLASVLLSTYFLWFYFLARTLTGPKMWPMLGSVPELLVNRNRVHDWMTSNLRQTEGGSGSATYQTCTLCLPFFARKQGFFTVTSCPRNIEHILRTRFDNYPKGPRWQTAFHDLLGQGIFNSDGETWLMQRKTAALEFTTRTLRQAMARWVNRTIKNRLWCILDKAAKEKVSVDLQDLLLRLTFDNICGLTFGKDPETLSPDLRENPFTVAFDTATEITLQRLLYPGIIWRFEKLLGIGKEKKLEQSLKIVETYMNDAVSAREKSPSDDLISRFMKKRDAAGKPLSSTALRQIALNFVLAGRDTSSVALSWFFWLVMNHPAVEDKILAELTAVLHSTRGDDRRRWTEEAVDFEEAERLVYLKAALAETLRLYPSVPEDFKHAVADDVLPDGTVIPAGSTVTYSIYAMGRMKSVWGEDCMEFKPERFLSVQGDRFESPKDGYKFVAFNAGPRTCLGKDLAYLQMKSVASAVLLRYRLSPVPGHRVQQKMSLTLFMKNGLRVFLQPRQLQPHTATSA* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02406 525 SUPERFAMILY Cytochrome P450 23 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02406 525 PANTHER CYTOCHROME P450 24 509 - -
Lapu6g02406 525 CDD CYP86A 77 508 - -
Lapu6g02406 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Lapu6g02406 525 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02406 525 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02406 525 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02406 525 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02406 525 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02406 525 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02406 525 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02406 525 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02406 525 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02406 525 Gene3D Cytochrome P450 28 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02406 525 FunFam Cytochrome P450 27 518 - -
Lapu6g02406 525 Pfam Cytochrome P450 96 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02406 Lapu-Chr6 23819912 23821714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02406 4 515 Cytochrome P450 AT5G58860 73.099 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02406 K15401 - gmx:100787559 927.546