Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02390 ATGCTTCACTTCACACTCACTCTAATGGGGGTTTCATGGGAAGAAAGTGTCACTTATTCCATCAACACAATCTACCTTCTCTTCTCGGCCTACCTTGTCTTTGTCATGCAAATTGGCTTTGCCATGATATGTGCAGGTTCAGTGCGTGCCAAAAACGCCATGAACATAATGCTCACCAACGTGGTTGATGCAGTGGTTGGTAGCATCTCCTTCTACCTCTTTGGTTTTGCATTTGCATATGGCACTTCCAACCCTTTCATTGGCACTCATTTGTTTGCTCTCGCCCACATTCCAAATGCCACTTACGATTATGCTTTCTTCCTTTACCAATGGGCTTTTGCTATAGCTGTTACAGGCATCACAAGTGGCTCCATAGCTGAGAGAACTCAGTTCAGTGCCTATCTTGTTATCTCCTTTTTCCTTAGTGGCTTCGTGTACCCAATTGTTGTCCATTGGCTGTGGTCATCAAGTGGCTGGCTAAGTCCAAGTTCAACTCACTTGTTGCTGGGCTCAGGTGCCATTGACTTTGCTGGGAGTGGAGTGGTGCATTTGGTTGGTGCAGTTGCTGGGCTTTGGGGGTCCATCATAGAAGGCCCACGGACCGGCCGATTTGATGCTTTCGGCAGGCCCGTGACTCTAAGGGGTCACAGTGCAACACTTGTTGTACTTGGGACGTTTTTGTTGTGGTTTGGTTGGTTTGGGTTTAACCCAGGATCGTTTGACAAGATCCTTGTAGGATATCCCGGCACGTCTAACCAAGGCAATTGGACCTCGGTGGGTCGAACCGCCGTGACAACCACATTAGCTGGTTCGACGGCTGGAATAGTCACCTTGTTCGGTCGGCGGTTGTTGGTCGGCCACTGGGATGCAATGGATGTTTGCAATGGCTTGCTTGGTGGGTTTGTTGCCATCACCTCCGGATGCTCAGTTGTTGAGCCATGGGCTGCCATTATTTGCGGGTTTGTTTCAGCATGGATTCTAATTGGGCTGAACATTGTAGCCCTAAAAATGAACTATGATGATCCATTAGAGGCAGCCCAATTGCATGGTGGGTGTGGCACTTGGGGTTTGTTGTTTACTGGGTTGTTTGCCAAAGAGGAGTTTGTGGTCCAAGTCTATAATTATGGCGAGATTGGGGTTAGAAGACCCTATGGACTCCTACTTGGAGGTGGATGGGGATTGTTTGGAGCCCAAGTGATTGAGATTTTGACAATCTTTGGATGGGTAAGTGTAACGATGGGCCCTATATTCTATGCCTTGCACAAGCTTGAGATATTGAGAATTCCTGTTAATGAAGAAGTCACCGGCCTTGATATTTCTAGTCATGGAGGTTATGCTTATGCTCAAGAAAACTATTATCTCAGACTTTATGGAGATTATACGCCTATTCAACATGGTCTATCTTAG 1407 0.4698 MLHFTLTLMGVSWEESVTYSINTIYLLFSAYLVFVMQIGFAMICAGSVRAKNAMNIMLTNVVDAVVGSISFYLFGFAFAYGTSNPFIGTHLFALAHIPNATYDYAFFLYQWAFAIAVTGITSGSIAERTQFSAYLVISFFLSGFVYPIVVHWLWSSSGWLSPSSTHLLLGSGAIDFAGSGVVHLVGAVAGLWGSIIEGPRTGRFDAFGRPVTLRGHSATLVVLGTFLLWFGWFGFNPGSFDKILVGYPGTSNQGNWTSVGRTAVTTTLAGSTAGIVTLFGRRLLVGHWDAMDVCNGLLGGFVAITSGCSVVEPWAAIICGFVSAWILIGLNIVALKMNYDDPLEAAQLHGGCGTWGLLFTGLFAKEEFVVQVYNYGEIGVRRPYGLLLGGGWGLFGAQVIEILTIFGWVSVTMGPIFYALHKLEILRIPVNEEVTGLDISSHGGYAYAQENYYLRLYGDYTPIQHGLS* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02390 468 Gene3D Ammonium transporter AmtB like domains 11 457 IPR029020 -
Lapu6g02390 468 Pfam Ammonium Transporter Family 26 447 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lapu6g02390 468 FunFam Ammonium transporter 7 454 - -
Lapu6g02390 468 ProSitePatterns Ammonium transporters signature. 175 200 IPR018047 GO:0008519|GO:0016020|GO:0072488
Lapu6g02390 468 SUPERFAMILY Ammonium transporter 19 428 - -
Lapu6g02390 468 PANTHER AMMONIUM TRANSPORTER 18 443 - -
Lapu6g02390 468 NCBIfam ammonium transporter 22 447 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02390 Lapu-Chr6 23635137 23636659 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02390 15 451 Inorganic Solute Cotransporters AT1G64780 66.216 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02390 K03320 - pvy:116129597 749.199