Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02383 ATGATCCAAGGAGGTGATTTTACACATGGCAATGGAATGGGCGGAGAATCAATTTACGGAGAGAAGTTTGCCGATGAGAACTTCAAATTAAAGCATACTGGACCGGGAGTTCTGTCAATGGCAAACGCTGGTCCTGATACCAACGGTTCACAATTTTTCATCACAACCGTGACAACTAGCTGGTTGGACGGAAGGCATGTTGTTTTTGGTAAAGTTCTTTCTGGAATGGATGTTGTTTACAAGGTTGAAGCTGAAGGAACGCAAAGTGGCACTCCCAAGAGCAAGGTTGTGATTGCTGACAGCGGTGAACTTCCTCTGTAA 321 0.4486 MIQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGVLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGTQSGTPKSKVVIADSGELPL* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02383 106 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 101 IPR002130 GO:0000413|GO:0003755
Lapu6g02383 106 Gene3D - 1 105 IPR029000 -
Lapu6g02383 106 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 104 - -
Lapu6g02383 106 FunFam Peptidyl-prolyl cis-trans isomerase 1 104 - -
Lapu6g02383 106 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 79 IPR002130 GO:0000413|GO:0003755
Lapu6g02383 106 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 36 51 IPR002130 GO:0000413|GO:0003755
Lapu6g02383 106 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 51 63 IPR002130 GO:0000413|GO:0003755
Lapu6g02383 106 SUPERFAMILY Cyclophilin-like 1 104 IPR029000 -
Lapu6g02383 106 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 103 IPR002130 GO:0000413|GO:0003755
Lapu6g02383 106 MobiDBLite consensus disorder prediction 86 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02383 Lapu-Chr6 23569112 23572814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02383 1 83 U-box Gene Family AT5G67530 54.762 5.90e-21 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02383 K01802 - cpap:110823753 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02383 6 23569112 23572814 Lapu6g02383 6 23569112 23572814 ECH