Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02381 ATGACACCACCCTTCACTCTCTCCCTTTCCCTCTTCGCCGTTTTCTCTATAACCGCCGTGCACGGCCTCGGCTCCGCCGCCACCACCGCCGTCACTTACGGCACCGCCACCGTGTGCGGGATCGTCGCGGGGGAGATCCACCACCGCATCCAGTGCTCCCGGGATGGCAGGCGCGTCCCTCTCACTCTCCCCAACGTCTCCTTCGAGGCCATCTCCGGTGGCAGGAGCTTCTTCTGCGGCCTGCGGTCTGGCGGCAGGAGCCTCCACTGCTGGGACACCGCCGGCGCAGATGGTGCGTTCTGCCCGAAGAGGGTCTTCCACAGCGACGTGGTGCAGTTGGCTGACGTGGCAGTTGGTGACTCTCAGGTGTGCGCGAGGGAGGTGCAATCCGGTGTGGTGAGGTGCTGGAGAGGAAACGGGAGGATCGAGTTTGTTTCTCCCTCGGAGAGGTTAAGGTTTCGGAGTGTCACATGTGGTCGTGGTTTTTCATGTGGGATATTGAGAGAGAGTAGGAGGGTTGTGTGCTGGGGTGGTGGTGGTGGTGGTGGTGGTGATGAAGGTGCATATATCAGTGGAGAGATTCAAAGAAAGTTTGAGAATTTTTCTATGTCGAGTTTGGTTGCTGGGGTGTCTCATGCATGTGGTTTGACTCTTCATGGGGCTTTGGTTTGTGGAGGGAACAATGGTTCAGGTCAACTTGGAAACAGTATCTTTTTAAGTTCTTTGGATTTTTCTGGTCTTGCTTTGGGAGAGGGTTTTACATGTGGTATTAGGCGGAGGAATGGGGTTGTTGTGTGTTGGGGTAGTGGTTTTGATAGTGATGTGGTGAAGGGTGTTTCTTTTGAGTCTCTTGTTGCTGGTTTGGATTATGTTTGTGGGTTGACAACTAGGAATTTGTCTGTGGTTTGTTGGGGTGGTAAGGGTAGGTTTGATGTGCCTAATGAGATTTCATTGGGAGTGATTCTCCCTGGTCCTTGTATTGAGGGTGGCTGTGGTAGCTCTTGTGCTACATATCCTGATTCTGATGCTCTTTGTCAGGGGTCTGGAAGTATTTGTTATGCTTGCCAAACTGAGGTTCCACTAGCTGTGCCATTGTTTCCACCACCATCATCACAAGAGTCTTCTTCGCATGAAAGAAGAAACTTAAAGGAGTTTTTGGTGTTTTTGGTTGTTGGATCAGTTGGGGCTTTTGCGGGTCTGTGCACTATTGTTTATTGCCTTTGGTTTGGTGCAAGGAGGGTTTTGGTGAGGAGAGAAGTAGGTAATAGTTCTGTGAAGCCTACAAGCTCAGAGAGTGATGCCTATGTGGATATAATCCCAATGCCTAATGTTGGTTCCAATGGGACAACCTTCAGAACTTTTTCTAGCAAAAGTCATGGGTCAAGAAGGTTGAGGAGGCATAGGAGTGGTTCATCATCGAAGCATGTGGACAGAACTGAGAGTTTCTCATTTCGTGAACTGGCAACAGCAACTGACAATTTCTCATTGTGTAATAAGATAGGTGCTGGTAGCTTCGGCAGTGTTTACAAAGGCATGCTAGGAGATGGTCGTGAAGTGGCCATTAAAAGAGGAGATACTAGTACTGTGAAGAAGAAATTTCAGGAGAAAGAAATTGCTTTTGATTCTGAATTGGCCATGCTGTCCCGGCTTCACCACAAGCATTTGGTGAGGCTAATTGGGTTCTGTGAGGAGAATGATGAGAGGCTTTTGGTCTATGAGTACATGAGCAATGGCTCACTTTATGACCATTTGCATGACAAAAACAATGTTGAGAAGAGTAGCAGCATTTTGAATTCTTGGAAGATGAGGATCAAGGTTGCATTGGGTGCTGCTAGGGGAATTGAGTACATCCACAACTATGCTGTGCCACCCATTATTCACAGGGATATCAAGTCATCAAATATACTTTTGGACTCAAACTGGAATGCCAGAGTATCTGACTTTGGATTGTCACTAATTTGGCCCGAGACTGAGCAAGAATTAATGTCCACCAAGGCAGTTGGAACTGTTGGTTACATAGACCCTGAGTACTATGTGTTGAATGTGCTAACCACAAAGAGTGATGTGTATGGTTTAGGAGTGGTGATGCTGGAGCTTCTCACAGGAAAGAGAGCTGTGTTCAAAACTGAAGATGGTTCAAGCCCTATAGGGGTAGTGGAACACACAGGGCCAAAGATAGCCTCAGGAGAGCTTTGGAATGTGTTGGATTATAGAGTTGGACAGCCAGAAGTGAACGAAGTTGAGTCCCTTGAAATCATGGCTTACACTGCTATGCACTGTGTGAACATGGAGGGAAAAGAGAGGCCAGAAATGACTGACATAGTTGCTAACTTGGAGAGGGCATTGGCTTTCATTGAAGGCAGCCCTACTAGCATCTCTCTAGCTTCATTCTCTGCCCCTCTTGAGTGA 2409 0.4815 MTPPFTLSLSLFAVFSITAVHGLGSAATTAVTYGTATVCGIVAGEIHHRIQCSRDGRRVPLTLPNVSFEAISGGRSFFCGLRSGGRSLHCWDTAGADGAFCPKRVFHSDVVQLADVAVGDSQVCAREVQSGVVRCWRGNGRIEFVSPSERLRFRSVTCGRGFSCGILRESRRVVCWGGGGGGGGDEGAYISGEIQRKFENFSMSSLVAGVSHACGLTLHGALVCGGNNGSGQLGNSIFLSSLDFSGLALGEGFTCGIRRRNGVVVCWGSGFDSDVVKGVSFESLVAGLDYVCGLTTRNLSVVCWGGKGRFDVPNEISLGVILPGPCIEGGCGSSCATYPDSDALCQGSGSICYACQTEVPLAVPLFPPPSSQESSSHERRNLKEFLVFLVVGSVGAFAGLCTIVYCLWFGARRVLVRREVGNSSVKPTSSESDAYVDIIPMPNVGSNGTTFRTFSSKSHGSRRLRRHRSGSSSKHVDRTESFSFRELATATDNFSLCNKIGAGSFGSVYKGMLGDGREVAIKRGDTSTVKKKFQEKEIAFDSELAMLSRLHHKHLVRLIGFCEENDERLLVYEYMSNGSLYDHLHDKNNVEKSSSILNSWKMRIKVALGAARGIEYIHNYAVPPIIHRDIKSSNILLDSNWNARVSDFGLSLIWPETEQELMSTKAVGTVGYIDPEYYVLNVLTTKSDVYGLGVVMLELLTGKRAVFKTEDGSSPIGVVEHTGPKIASGELWNVLDYRVGQPEVNEVESLEIMAYTAMHCVNMEGKERPEMTDIVANLERALAFIEGSPTSISLASFSAPLE* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02381 802 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 204 788 IPR044815 GO:0004674
Lapu6g02381 802 Gene3D Transferase(Phosphotransferase) domain 1 575 786 - -
Lapu6g02381 802 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Lapu6g02381 802 FunFam Somatic embryogenesis receptor kinase 1 465 574 - -
Lapu6g02381 802 SUPERFAMILY Protein kinase-like (PK-like) 471 778 IPR011009 -
Lapu6g02381 802 MobiDBLite consensus disorder prediction 454 475 - -
Lapu6g02381 802 Gene3D - 23 350 IPR009091 -
Lapu6g02381 802 Pfam Protein kinase domain 497 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02381 802 ProSitePatterns Protein kinases ATP-binding region signature. 500 531 IPR017441 GO:0005524
Lapu6g02381 802 ProSiteProfiles Protein kinase domain profile. 494 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02381 802 SUPERFAMILY RCC1/BLIP-II 24 270 IPR009091 -
Lapu6g02381 802 FunFam Serine/threonine-protein kinase-like protein CCR4 575 793 - -
Lapu6g02381 802 CDD STKc_IRAK 500 780 - -
Lapu6g02381 802 Gene3D Phosphorylase Kinase; domain 1 465 574 - -
Lapu6g02381 802 SMART serkin_6 494 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02381 802 MobiDBLite consensus disorder prediction 458 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02381 Lapu-Chr6 23543546 23545954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02381 6 793 Receptor kinase-like Gene Family AT3G55950 51.157 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lapu6g02381 Pkinase 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02381 - - gmx:100776682 1313.9