Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02361 ATGGAATTCAACAAGTTCAGAATCAGAAGCTATGAGGGGCAATACGATAGGGCTCAAGTGGAAGATCTTGAGAGAAGATGCGAGGTAGGGCCATCAGAAAGCGTGTTCCTCTTCACAGACACTATGGGTGACCCCATTTGTAGGATTCGGAACAGTCCAATGTACATGATGCTGGTGGCAGAGTTGGAGAATGAACTGGTTGGTGTGATTCAAGGGTCTATAAAGGTGGTGACGGTTCATGGTCATCCTCCAAAGGATTTGGCAAAGGTGGGGTATGTCCTTGGCCTAAGGGTATCACCCCATCATCGAAGAAAAGGGATTGGCTCAAGTCTTGTGAGAAGGCTGGAAGAATGGTTCAGTTCCAAGGATGCGGACTATGCATACATGGCAACAGAAAAAGACAACCATGCCTCAGTTAGTCTCTTTATGGACAAGTTTGGCTACACCAAGTTTAGGACTCCAGCTATTCTTGTGAACCCGGTGAACCATCATTGCTTTCAAGTATCATCCAACATTGAGATAGCAAGGTTGAAGGTTGACCAAGCTGAATACCTCTATAGAAGATTCATGGGGTCCACAGAGTTTTTTCCTAATGACATAGGCAACATACTAAGGAACAAGCTAAGTCTGGGGACATGGGTGGCCTATTTCAAGGGAGATGTAGCTTGGGGAGATTTTGGGTCAGATGGACAGGTCCCTAATAGTTGGGCTATGCTGAGTGTATGGAACAGTGGGGAGATATTCAAGCTAAGGCTAGGGAAAGCACCTTTTTCTTGCTTGTTATGCACCAAGAGTTGGTGGTTGATTGATAAAATCTTCCCATGCTTGAAACTGCCAACCATACCTGATTTCTTCAACCCATTTGGGTTCTATTTCATGTATGGGGTGCACCATGAAGGCCCATTCTCAGGGAAGCTAGTGAGGGCCTTGTGCCAATTTGTACACAACATGGCTGCTGAATCCAAGGATGAGAATTGCAAGATCATTGTGACTGAAGTTGGAGGAAGAGATGAGCTCAACCATCATATTCCACATTGGAAATTGCTCTCATGCCCAGAGGACTTGTGGTGCATAAAGTCATTGAAAAATGAAGGGACAAATAACAAGTTCCATGAATTAACCAAAACCCCACCAACAAGAGCTCTTTTTGTAGACCCAAGAGAGGTTTAA 1170 0.4479 MEFNKFRIRSYEGQYDRAQVEDLERRCEVGPSESVFLFTDTMGDPICRIRNSPMYMMLVAELENELVGVIQGSIKVVTVHGHPPKDLAKVGYVLGLRVSPHHRRKGIGSSLVRRLEEWFSSKDADYAYMATEKDNHASVSLFMDKFGYTKFRTPAILVNPVNHHCFQVSSNIEIARLKVDQAEYLYRRFMGSTEFFPNDIGNILRNKLSLGTWVAYFKGDVAWGDFGSDGQVPNSWAMLSVWNSGEIFKLRLGKAPFSCLLCTKSWWLIDKIFPCLKLPTIPDFFNPFGFYFMYGVHHEGPFSGKLVRALCQFVHNMAAESKDENCKIIVTEVGGRDELNHHIPHWKLLSCPEDLWCIKSLKNEGTNNKFHELTKTPPTRALFVDPREV* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02361 389 CDD NAT_SF 57 128 - -
Lapu6g02361 389 Gene3D - 16 155 - -
Lapu6g02361 389 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 389 - -
Lapu6g02361 389 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 162 IPR000182 GO:0016747
Lapu6g02361 389 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 16 152 IPR016181 -
Lapu6g02361 389 Pfam Acetyltransferase (GNAT) family 47 148 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02361 Lapu-Chr6 23236186 23239125 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lapu6g02361 Acetyltransf_1 9.6e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02361 - - gmx:100799507 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02361 6 23236186 23239125 Lapu6g02361 6 23236186 23239125 ECH