Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02357 ATGGGAGAAGCTGCAAAGAAGATTTGCCTTGCTTCACTGCAAGCTCAATCACCCCTAGTAATTCCACTGCACTCAAAATCTCTTTCTTTTATGTTTCCAACTAAAAAAAAAACTAAGTTGTTTAGAGGTGTTGATTCATCGTTTCAGCTGAGGATTGGTGATGCTGAAGGGAGAACCAAGCCTGAGTTGGATCTCAAACTTGACCATTCTAACACTTATTCTGCAGAAGCAAGAGGCAACTATAACTATTCTATTCATCAAGCTGAGAAAAATCTCATCATTGGTAGTTCTACAACTCCTGGTGCTGGTATCAATTTCAGCACAAACCAAACCTACAAAAGACAAACAAGTAAACCTCGCTTGGATCTCATGGTGACCAAACAAAAGGAGGATTCAAAAAGGCTAAAGAGGATGATGTCTAATCGAGTTTCTTCAGAGAAATACAGGAAGAAGAAGATGCTCTACATTGACCATTTGGAAAATCAGTTAAGAACTCTTGGGCAACAAATCTCCAACATTCGTTATCAAATTCAAAAGACTAAGAATGCTCAGCGATCATTGCTGATTGAACAGCATGAAGTGAAATTAAAAATAGCAGCTTTTGAAAAGGAGAGAGTAATCAAAGAAGTTGAAATCGAAAAGAACATAGCAGAAGGGAATAGACTGAGAGAGCTTCAAATTAAGCAATTGAAAGCTACAGAAGATGCAAAGCGTAATTCGGATTCTGGTTTGCATGCAATTAATGAACAGCTCGATCTCAAGCTCTAG 768 0.3815 MGEAAKKICLASLQAQSPLVIPLHSKSLSFMFPTKKKTKLFRGVDSSFQLRIGDAEGRTKPELDLKLDHSNTYSAEARGNYNYSIHQAEKNLIIGSSTTPGAGINFSTNQTYKRQTSKPRLDLMVTKQKEDSKRLKRMMSNRVSSEKYRKKKMLYIDHLENQLRTLGQQISNIRYQIQKTKNAQRSLLIEQHEVKLKIAAFEKERVIKEVEIEKNIAEGNRLRELQIKQLKATEDAKRNSDSGLHAINEQLDLKL* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02357 255 Gene3D - 132 186 - -
Lapu6g02357 255 SMART brlzneu 129 193 IPR004827 GO:0003700|GO:0006355
Lapu6g02357 255 Pfam bZIP transcription factor 131 188 IPR004827 GO:0003700|GO:0006355
Lapu6g02357 255 SUPERFAMILY Leucine zipper domain 133 186 IPR046347 GO:0003700|GO:0006355
Lapu6g02357 255 Coils Coil 156 176 - -
Lapu6g02357 255 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 136 151 IPR004827 GO:0003700|GO:0006355
Lapu6g02357 255 PANTHER BASIC LEUCINE ZIPPER 34 125 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02357 Lapu-Chr6 23179512 23180966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02357 131 200 bZIP Transcription Factor Family AT5G07160 40.000 5.16e-07 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu6g02357 bZIP_1 3.7e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02357 - K10421 gmx:102664304 211.46