Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02354 ATGGAAGAACGGTGGAGGTTTATCACTTGGTTGAATCTATTACGCGTGCTTGTGGCGGTGGTGTTTCTGCTGTTCTTGTTCACCATGGAACCTGTTCGGTGTTCCACTATCAACTCCGAAGGGTTGGCTCTGCAAAAGATGAGGGAGAAAGTGGTGAGAGATCCATTGGGTGGTTTATGGAGTTGGAATAAAGGAGTGGTTGATCACTGTTCTTGGTTTGGAGTAGAGTGCTCCCATGGCAATGTTGTATCCTTGAACTTGAAAGATCTATGTCTCCACGGAACACTAGCACCTGAAATTGGAAAGCTAGTTCACATAAAATCTATTATTTTGCGCAACAATTATTTCCATGGAGAAATCCCCAAGGAAATACTACAATTAGAGGAGCTAGAAGTTCTTGACTTAGGATATAACAACTTTAGTGGACCATTTCCATCTGAAGAACTTAGCAGCAATTCATCCCTGATTACCCTTTTATTGGACAACAATGACCATCTTGCTTACTTAACTCCGGAAGTATATGAGCTCAAGATATTTTCTGAAATGCATGTACATGAAAAACAACTTACTGGTGCTACCACTAAAGAAGCATGTGTTACCAAATCAAATACCAGGCACATTCGCCAACATGGGAATACAGCATACGGAAGGAAACTTCTCCAAGAAGCAAATGGTACTGAGAGGGGTGATGATGACAAAGAAGCTCTTTCACCATCACCATCACCTTTACCCTCCACACTATCACCACTTTCAGACCCTTTCTCACCATCACCGTCAGAGAGTCCCTCAGAGTCACCAACATCTCCAGAACTATCCCCCTCACCGTCTCCATCTCTCTCCGGTTTCTTTTTCTCCCTTTCACCCTCACCTTCACCTGTTGTAGCACCAACTCCAGACACATCACCTCCAGCAAATCCACCTATGATTGTGTCCACACCACCACAGTCCAATTGGGTTTCAATGCCTTCTCCTGCTTCATCTGCAAACAGTTCAAACACAAACCAACACACTGTGATTATATGGTCCACAGTTGGGGGGTTCTCCTTGATTTTGGTGTCGGCCATTGTTTTCCTTTGCTTCAGAAGTAATAAGGTTGTCACTGTAAAACCTTGGGCAACAGGCTTGAGTGGCCAGCTGCAGAAAGCCTTTTTATCAGGTGTTCCGAGTCTGAAACGAACAGAACTTGAAGTAGCTTGTGAGTATTTCAGCAACATTATTGGTTCACTACCTGATGGGACTATTTACAAGGGGACTCTCTCCAGTGGAGTTGAGATAGCTGTAGCATCCTCTGCAGTGACTTCATCCCAAAACTGGTCCAAAATTATGGAAACTCAATTCCGAAAGAAGATAGCGATGTTGTCAAGAATGAACCACAAGAATTTCGTGAATCTAATTGGATATTGTGAAGAGAATAAACCATTCACAAGGATGATGGTTTTTGAGTATGCTCCAAATGGAACTCTATTTGAGCATCTACACATTAGAGAAGCAGAACGACTAGACTGGGGAATGAGAATAAGGATAGCTATGGGAATAGCTTACTGTCTGGAGCACATGCATCAGCTGACACCACCCATTGCCTATAAAAGCATACTATCTTCCTCTATATATCTGACTGAAGATTATGCTGCTAAATTATCAGACCTTAGTTTCTGGACTGACATAGTCTCTACAAAGAAGGGTTCTGAAGCCGCACAGCTCTTAGAAACAGCTCCAGAATATATCAAGGCCAATGTTTACGGCTTTGGAGTACTATTGTTTGAATTGATTACAGGAAGAATTCCCTTTGCAGTGGAGAATGGCTTATTTGAAGATTGGGCAGCAGAATATATAAAGGGACAATCCTTGAGAGACATAGTGGATTCAAACCTGAACTCTCTGCAAGCAAATGAAATCCAGAAATGGGAAGAGGTGATTAACAGCTGTGTAGATCCCGATCCAGAAAAAAGGCCAACTATGAAGGAGGTTACTTCTAAGTTGAAGGAAATCACCACCATAGGACCTGACGGAGCAACTCCAAAAGCATCTCCTCTTTGGTGGGCAGAAATAGAAATTATGTCCACTGACTTAAGTTCAGACGTGAATCCATAA 2091 0.4261 MEERWRFITWLNLLRVLVAVVFLLFLFTMEPVRCSTINSEGLALQKMREKVVRDPLGGLWSWNKGVVDHCSWFGVECSHGNVVSLNLKDLCLHGTLAPEIGKLVHIKSIILRNNYFHGEIPKEILQLEELEVLDLGYNNFSGPFPSEELSSNSSLITLLLDNNDHLAYLTPEVYELKIFSEMHVHEKQLTGATTKEACVTKSNTRHIRQHGNTAYGRKLLQEANGTERGDDDKEALSPSPSPLPSTLSPLSDPFSPSPSESPSESPTSPELSPSPSPSLSGFFFSLSPSPSPVVAPTPDTSPPANPPMIVSTPPQSNWVSMPSPASSANSSNTNQHTVIIWSTVGGFSLILVSAIVFLCFRSNKVVTVKPWATGLSGQLQKAFLSGVPSLKRTELEVACEYFSNIIGSLPDGTIYKGTLSSGVEIAVASSAVTSSQNWSKIMETQFRKKIAMLSRMNHKNFVNLIGYCEENKPFTRMMVFEYAPNGTLFEHLHIREAERLDWGMRIRIAMGIAYCLEHMHQLTPPIAYKSILSSSIYLTEDYAAKLSDLSFWTDIVSTKKGSEAAQLLETAPEYIKANVYGFGVLLFELITGRIPFAVENGLFEDWAAEYIKGQSLRDIVDSNLNSLQANEIQKWEEVINSCVDPDPEKRPTMKEVTSKLKEITTIGPDGATPKASPLWWAEIEIMSTDLSSDVNP* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02354 696 MobiDBLite consensus disorder prediction 242 273 - -
Lapu6g02354 696 SUPERFAMILY L domain-like 36 213 - -
Lapu6g02354 696 FunFam Leucine-rich repeat receptor-like kinase 43 168 - -
Lapu6g02354 696 SUPERFAMILY Protein kinase-like (PK-like) 386 660 IPR011009 -
Lapu6g02354 696 MobiDBLite consensus disorder prediction 290 309 - -
Lapu6g02354 696 Pfam Protein tyrosine and serine/threonine kinase 405 660 IPR001245 GO:0004672|GO:0006468
Lapu6g02354 696 Gene3D Ribonuclease Inhibitor 36 235 IPR032675 -
Lapu6g02354 696 Gene3D Phosphorylase Kinase; domain 1 376 482 - -
Lapu6g02354 696 MobiDBLite consensus disorder prediction 291 309 - -
Lapu6g02354 696 MobiDBLite consensus disorder prediction 225 279 - -
Lapu6g02354 696 FunFam Inactive receptor-like serine/threonine-protein kinase 374 482 - -
Lapu6g02354 696 Gene3D Transferase(Phosphotransferase) domain 1 483 668 - -
Lapu6g02354 696 PANTHER PROTEIN MALE DISCOVERER 2 17 688 - -
Lapu6g02354 696 ProSiteProfiles Protein kinase domain profile. 400 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02354 696 Pfam Leucine rich repeat N-terminal domain 38 78 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02354 Lapu-Chr6 23073325 23078283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02354 380 665 Receptor kinase-like Gene Family AT4G31110 32.248 4.89e-38 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lapu6g02354 PK_Tyr_Ser-Thr 3.3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02354 - - gmx:100814122 1025.39