Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02353 ATGGCTCGGAATGAAGGTAGTAATAGATGTTCCTCCATCACTATACCGCTTCTAAGGGATGAAGAATTGCAGCAAGAAAAAGTCTGTGATCAACACACAGCCCAAAATGTTTGTGGCACATCCTTCTTCAAGACCTGCTTTCATCTTGTTAATGCCCTCTCAGGAGTTGGTACAATATCCGTGCCTTATGCACTGGCATCTGGGGGATGGTTAAGCATATCCCTACTCTTTGTGATTGCCATTGCTTGCTATTACACTGGCATATTGATCAAAAGATGCATGGACATGGACCCTAGTATCAAGACTTTTCCTGACATAGGTCAACGTGCATTTGGATACAAGGGGAGGCTGATGATATCAGTTGCCATGAATTCGGAGCTCTACCTAGTTGTAACAGGTTTTCTGATTTTAGAGGGTGACAACCTTAACAAACTAGTACCAAACATGCAATTTGACCTTGCAGGGTTAACAATTGGAGGTACCACAATTTTCACCATAATTGCTGCCCTTATTATTTTGCCTACTGTTTTGTCAGAAGACCTGAGCTTGTTATCTTATGTCTCTGCAAGTGGGGTTTTAGCTTCTTCTATTTTCCTCCTCTCTCTATTATGGAACGGCATTATCGATGGCACAGGATTTCATGCAAAGGGAACACTTTTTAAATTGAGTGGAATACCTTACACTGTCAGTTTATATGCTTTTTGTTTCAGTGCTCATCCAATCATTCCCAATCTCTACATTTCTACGAGAAACAGAGGCCAGTTCTCTAGAGTCCTGTTTGTATGTTTTTCAGCATGCACTCTTGTTTATGCAGCAGTGGCTGCTCTGGGCTTCTTAATGTTTGGAGAAGATGTGAAATCACAAGTGACTTTGAACCTCCCAAGTGGCAAGTTCAGTTCACATGTAGCAATATATGCTACCTTGGTTAATCCTCTAACGAAATATGCATTGATGCTTTCTCCAATCATAAATGCAGTAAAAAACAAGGTTTCATGCCATTACCAAAAAAGGTTCACACACGTGGTTGTTAGTACCTCTTTGCTGATGAGTACTCTTATTGTAGCTGTGGCCATTCCCTTATTTGGATCTCTTATGTCACTTGTTGGGGCATTGCTAAGTGTGTCAGCTTCAATTTTAGCACCTTCAATGTGCTACTTGAAGATTTCAGGAGCTTGCAAAAGATTCGGGTGTGAAATGATCATTAACTATTCGATAATAGCAATGGGGGTTCTTATTGTTGTTGTAGGGACTTATACATCAGGCATGGATATAGTTCAAAATTTTAATTGTCGTGGGGACAACGTTGATTTGCACACGTAA 1320 0.4053 MARNEGSNRCSSITIPLLRDEELQQEKVCDQHTAQNVCGTSFFKTCFHLVNALSGVGTISVPYALASGGWLSISLLFVIAIACYYTGILIKRCMDMDPSIKTFPDIGQRAFGYKGRLMISVAMNSELYLVVTGFLILEGDNLNKLVPNMQFDLAGLTIGGTTIFTIIAALIILPTVLSEDLSLLSYVSASGVLASSIFLLSLLWNGIIDGTGFHAKGTLFKLSGIPYTVSLYAFCFSAHPIIPNLYISTRNRGQFSRVLFVCFSACTLVYAAVAALGFLMFGEDVKSQVTLNLPSGKFSSHVAIYATLVNPLTKYALMLSPIINAVKNKVSCHYQKRFTHVVVSTSLLMSTLIVAVAIPLFGSLMSLVGALLSVSASILAPSMCYLKISGACKRFGCEMIINYSIIAMGVLIVVVGTYTSGMDIVQNFNCRGDNVDLHT* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02353 439 Pfam Transmembrane amino acid transporter protein 40 419 IPR013057 -
Lapu6g02353 439 PANTHER AMINO ACID TRANSPORTER 32 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02353 Lapu-Chr6 23061675 23064580 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02353 21 425 Amino Acid or Auxin Permease AAAP Family AT3G28960 51.724 2.50e-145 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02353 K15015 - gmx:100784690 617.846