Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02352 ATGTCCATGGCTGGTACTGTGCAAGGCGAAAGATGCTCCTCCATCATCACCATACCCCTTCTGGACGATGAAAGAGTGCACCAAGTGAATGTCTCAGATGAGGTGTTGGAGGCCAAAGCTTGGGATCTGCACACATCTATTGAGGGTAACACCTCCTTTTTCAAGACCTGCTTCAACCTGATTAATGCCCTCTCAGGAGTTGGTATTATCTCCATGCCTTATGCACTGGCATCTGGGGGATGGTTAAGCATATCACTACTATTTGTGATTGCCATGGCTTGTTGTTACACTGGCATGTTGGTCAAAAGATGCATGGACATGGACCCTGATATCAGGACCTTCCCTGACATAGGTCAACGTGCATTTGGAGACAAGGGGAGGCTAATGGTATCAATTGCCATGAATTCTGAGCTTTATCTAGTTGTAACAGGTTTTCTGATTTTAGAGGGAGACAACCTTAACAAATTAGTACCAAATATTCAAGTTAACCTTGCAGGTTTAACATTTGGTGGTACAACAATTTTTACCATACTTGCTGCCCTTGTTATTCTGCCTAGTCTTTTGTTGGAGGATTTGAGTATGCTGTCTTATGTGTCTGCTAGTGGGGCTTTGGCTTCTTCCATCTTCATCCTCTCTCTATTTTGGAATGGTACCATTGATGGCACTGGATTTCATGCAAAGGGAAAACTCTTCAGATTTAGTGGAATACCCTCTGCTGTCAGTTTATATGCCTTCTGTTATAGTGCTCATCCAATCCTTCCCACTCTCTACAATTCTATGAGAGACAAAAGTCAATTCTCCAGGGTTCTATCTTCGTGCTTTTTAGCATGCACTCTGGGTTATGCAGCAGCAGGTGTTTTGGGCTACTTGATGTTTGGACAAGAGGTTGAATCACAGGTGACTTTGAACCTACCAACAAACAAGTTCAGTTCACATGTGGCAATATTCACCACCTTGGTCAATCCTATAACCAAATATGCATTGATGCTTACCCCAGTCATAAATGCTGTAAAAAACAAGATTTCGTGGCATTACAACAAAAGATTCATTCACACGCTTGTTAGTACCTCCATGCTCATTAGCACTCTAACTGTAGCTGTGGCTATACCCTTGTTTGGATATCTCATGTCACTGATTGGGGCATTGCTAAGTGTGTCAGCTTCAATTTTAGTACCATCAGTGTGCTACTTGAAGATTTCAGGAGCATACAAGACATTTGGGTCTGAAATGATCATCAACTATTCAATAATTGTATTGGGGATCACCATTGCTGTTGTGGGTAGTTATACGTCTATTGCAGATATAGTTCATAATTTGTAA 1320 0.4182 MSMAGTVQGERCSSIITIPLLDDERVHQVNVSDEVLEAKAWDLHTSIEGNTSFFKTCFNLINALSGVGIISMPYALASGGWLSISLLFVIAMACCYTGMLVKRCMDMDPDIRTFPDIGQRAFGDKGRLMVSIAMNSELYLVVTGFLILEGDNLNKLVPNIQVNLAGLTFGGTTIFTILAALVILPSLLLEDLSMLSYVSASGALASSIFILSLFWNGTIDGTGFHAKGKLFRFSGIPSAVSLYAFCYSAHPILPTLYNSMRDKSQFSRVLSSCFLACTLGYAAAGVLGYLMFGQEVESQVTLNLPTNKFSSHVAIFTTLVNPITKYALMLTPVINAVKNKISWHYNKRFIHTLVSTSMLISTLTVAVAIPLFGYLMSLIGALLSVSASILVPSVCYLKISGAYKTFGSEMIINYSIIVLGITIAVVGSYTSIADIVHNL* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02352 439 PANTHER AMINO ACID TRANSPORTER 48 429 - -
Lapu6g02352 439 Pfam Transmembrane amino acid transporter protein 50 432 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02352 Lapu-Chr6 23050416 23057339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02352 36 436 Amino Acid or Auxin Permease AAAP Family AT3G28960 52.985 2.67e-154 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02352 K15015 - gmx:100784690 736.487