Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02348 ATGGCCGCAGCCTTGGAGTGCTGGTCGCGCCGCGCCACCACAGATGAGGACGACGCATTCCTCGCCGCACATTCCTCACAACCCCGAGAGTCTTCTTCTTCTTCTTCTCCCTCTTCCTCTCTCGTCCACAAGAAGCTCCTCAAACTCACTCGCAACGTCTCAGAGGCTCTCTCTTCCCTCAGAAACTCCATCAACGCTATGCATGATTCTTCCAAACCCGACGCTCCTCGCAACCTAGTGTGGACCACCGTCGTGCGCAATCTCAGCCACCTTTACCCAGGGACCCATCTCCCTGAGAAGCTTGTCTGCAACATTCGCAGGCACTATGACTCCCTGCCTCTCAGTTATTCTCAAGCGGGGTTTGATGTGAAAGACGTGTTTCTTCACATGAAGCTGATGGAGCAAGCTTTGGAAGATGAGCAGGCTGCGATTTTGATTCAAGAGGAGGGTGATGGTGAGATTCAAATTCAGGGGTCTTTGTTCAAGTTGACATTTGCTTGCAACTCTCCTATTTCATGGCCCGCAATGTCCGGTGCGTTGGATGGCTACTCCATTTGCTGCAAGAAGATTCAGATATTTGAGAAGAAAGGATTCACCCTTGGGATTGTGCTTCTTTTTGCACTGTCTAGTGGTGGGCTAGATAAGTTGGTCAGGACCCGGGTTGAAAGCGCTCTCAAGATTTCCATGAAGAGGACTAAAGCTGGTGGTGTGAAGCTTCCCTTTGGACTTTGTGGATGTCAAGAGGAGAACACAAAAGGGAGAGGACTTGGAGAGATTGAGGAAGATGGTGGTGATGCATGCTGTGGAAATCGGTTTGAGAATTTGGGCCAAAATATTCAGCTTCAGCTTCAGGTGCCATTGCCTAGTTCATCTTTTCTTGTAGCAGTAGACGAATGGCAGACTATTCAAACAGGTGGAGATGGTATTGAAAAATGGTTGTTGAACTCAGATAGTCTTGAGTTTGCAGAACAGATTGGGCCCAATTCGTACAAGGGGATGTACATGGGGAAAAAGGTTGGAATTGAGAAGCTTAGAGGGTGTGAGAAAGGGAACTCTTATGAGTTTGAGCTCAGGAAAGACCTATTGGCACTGATGACTTGTGGTCATAGAAGTATTATGCAGTTTTGTGGTGTTTGTGTGGATGAAAACTATGGCTTATGTGTGTTGACAAAACTTGTGGAAGGTGGATCTGTTCATGACTTAATGTTAAAGAACAAGAAGCTTCTGAGCAAGGATGTTGTAAGGATTGCAGTTGATGTGGCTGAAGGAATTAAGTTTATGAATGATCACGGTGTTGCATACAGAGACCTTAATACGCAGAGGATTCTTTTGGATAAGCATGGTAATGCTTGCTTGGGTGATATGGGTATTGTCACTGCCTGCAAGAGTGTTGGAGAGGCAATGGATTATGAAACTGATGGTTATCGGTGGCTAGCACCAGAGATAATTGCTAGTGACCCAGAGAGTGTGACAGAGACATGGATGAGTAACGTTTATAGTTTTGGAATGATTATTTGGGAGATGGTAACTGGTGAGGCAGCATATTCTGCATACTCACCCGTTCAAGCAGCAGTTGGCATTGCTGCTTGTGGCCTAAGACCTGAAATCCCTAAGGACTGCCCTCAAACTCTAAAGTCTCTCATGACAAAGTGCTGGAACCACACCCCTTCAAAACGCCCTAACTTCTCTGAAATTTTGGCCATATTGCTGCGACAAAACAATTACAATAGGTAA 1734 0.4631 MAAALECWSRRATTDEDDAFLAAHSSQPRESSSSSSPSSSLVHKKLLKLTRNVSEALSSLRNSINAMHDSSKPDAPRNLVWTTVVRNLSHLYPGTHLPEKLVCNIRRHYDSLPLSYSQAGFDVKDVFLHMKLMEQALEDEQAAILIQEEGDGEIQIQGSLFKLTFACNSPISWPAMSGALDGYSICCKKIQIFEKKGFTLGIVLLFALSSGGLDKLVRTRVESALKISMKRTKAGGVKLPFGLCGCQEENTKGRGLGEIEEDGGDACCGNRFENLGQNIQLQLQVPLPSSSFLVAVDEWQTIQTGGDGIEKWLLNSDSLEFAEQIGPNSYKGMYMGKKVGIEKLRGCEKGNSYEFELRKDLLALMTCGHRSIMQFCGVCVDENYGLCVLTKLVEGGSVHDLMLKNKKLLSKDVVRIAVDVAEGIKFMNDHGVAYRDLNTQRILLDKHGNACLGDMGIVTACKSVGEAMDYETDGYRWLAPEIIASDPESVTETWMSNVYSFGMIIWEMVTGEAAYSAYSPVQAAVGIAACGLRPEIPKDCPQTLKSLMTKCWNHTPSKRPNFSEILAILLRQNNYNR* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02348 577 ProSiteProfiles Protein kinase domain profile. 299 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02348 577 PRINTS Tyrosine kinase catalytic domain signature 496 518 IPR001245 GO:0004672|GO:0006468
Lapu6g02348 577 PRINTS Tyrosine kinase catalytic domain signature 426 444 IPR001245 GO:0004672|GO:0006468
Lapu6g02348 577 PRINTS Tyrosine kinase catalytic domain signature 540 562 IPR001245 GO:0004672|GO:0006468
Lapu6g02348 577 Pfam Protein tyrosine and serine/threonine kinase 352 568 IPR001245 GO:0004672|GO:0006468
Lapu6g02348 577 SUPERFAMILY Protein kinase-like (PK-like) 309 569 IPR011009 -
Lapu6g02348 577 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 72 569 - -
Lapu6g02348 577 MobiDBLite consensus disorder prediction 25 40 - -
Lapu6g02348 577 MobiDBLite consensus disorder prediction 19 40 - -
Lapu6g02348 577 Gene3D Transferase(Phosphotransferase) domain 1 312 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02348 Lapu-Chr6 23006308 23010211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02348 302 569 MAP Kinase Kinase Kinase AT2G17700 31.136 1.70e-50 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Lapu6g02348 PK_Tyr_Ser-Thr 9.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02348 - - gmx:100811417 993.416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02348 6 23006308 23010211 Lapu6g02348 6 23006308 23010211 ECH
Lapu6g02348 6 23006308 23010211 Lapu6g02348 6 23006308 23010211 PCT