Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02338 ATGGGTGGTGCTCCTCCTTCTCCAGCGTGGCTACACCGTTCACGCCGCCATCAGTGTGTTGCAGAGGATGAAAAGGAGACGAAACATTTGGAGGAAATGGAAGGAGCTAAGAGTGGTCTCCGTCTCTTCGAAATGGATCTTCTTGACTCCGACTCCATCGCTGCCGCAGTAAAGGGTTGCTCCGGCGTTATCCACCTTGCATGTCCTAACATCATTGATCAAGTCCACGACCCAGAGAAGCAGATACTGGAACCGGCGATAAAAGGAACGATTAAGGTGCTGAAGGCGGCGAAGGAAGTAGGGGCGGAGCGCGTGGTGGCGACGTCGTCGATCTCCTCCATCATGCCAAGCCCTAATTGGCCAGCTAATAAGATTAAGGGAGAAGACTGTTGGACAGACCTTGATTACTGCAAAAACAAGGAGTTGTTCTATCCGATGGCAAAGACTCTGGCAGAAAAAGCAGGATGGGAGTTTGCAAAGGAGACAAGTTTTGATGTTGTTATGATAAACCCTGGCACAGCACTGGGCACTCTCCTTCCACCAACCATCAATTCAAGCATGTCTGTGCTTGTTAGTGTTCTCAAAGGTGGGACAGAGACATACGAGGATTTTTTTATGGGAATAGCTCACTTCAAAGACATAGCAATGGCACATATTTTGGCACTTGAGAACAAGAAAGCATCAGGAAGGCACTTGTGTGTGGAATCTATTCGTCACTTTAGTGATATTGTAGATAAAGTTGCAGAGTTATACCCTGAATACAATGTGGCTAAGTTGCCAAAAGATACGCAGCCAGGGTTGTTGAGGGCAAGTGCAGAGGATGCATCAAAGAAGCTGATTGATTTAGGTCTAGAATTCACTCCTGCAGACCAAGTGATCAAGGATGCAGTGGAGAGTTTGAAGAGTAAGGGTTATGTC 918 0.4728 MGGAPPSPAWLHRSRRHQCVAEDEKETKHLEEMEGAKSGLRLFEMDLLDSDSIAAAVKGCSGVIHLACPNIIDQVHDPEKQILEPAIKGTIKVLKAAKEVGAERVVATSSISSIMPSPNWPANKIKGEDCWTDLDYCKNKELFYPMAKTLAEKAGWEFAKETSFDVVMINPGTALGTLLPPTINSSMSVLVSVLKGGTETYEDFFMGIAHFKDIAMAHILALENKKASGRHLCVESIRHFSDIVDKVAELYPEYNVAKLPKDTQPGLLRASAEDASKKLIDLGLEFTPADQVIKDAVESLKSKGYV 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02338 306 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 29 297 - -
Lapu6g02338 306 FunFam Dihydroflavonol reductase 16 306 - -
Lapu6g02338 306 CDD FR_SDR_e 22 284 - -
Lapu6g02338 306 Pfam NAD dependent epimerase/dehydratase family 23 229 IPR001509 -
Lapu6g02338 306 Gene3D - 11 306 - -
Lapu6g02338 306 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 24 300 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02338 Lapu-Chr6 22908713 22911323 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02338 22 306 Monolignol Biosynthesis Gene Families AT5G58490 62.807 3.50e-138 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02338 - - gmx:100806281 506.138