Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02328 ATGGAGGTAGGCCAGGACAACCACATTCGCGGTGCCTTACAGATTGGAACCGATGCACAGACATCCTTTGGAAGCTCTTTCATATGCCATAGCACAGTTAATCAAATCAACTCCAAGGGAATCTGGTTTGGAGATGACCCACTTACATATTCTCTCCCTATTTTCTTGCTCCAACTTTTTCTCATGTTCGTCTTCACCCATGTTTTTTACCTTATTCTCAAGCCCTTCGGTCAACCTTCTTTTGTTTCTCAACTTCTTGGTGGTGTTACTTTAGGTCCTTCTTTTCTGGGACACAATACAACATTTGCTGAGAGGCTTTTCCCATTAAAAGAGAGAAGTTTGCTTGATACCATGACCTTTTTCGGATTTATGTTATTCATCTTCTTAAGTGGGGTAAAGATAGATCCAACCATAACTTTTAGATCAGGTAGAAGGACTTGTGCCTTAGGAATTTTAGGCTACTTTGTTCCCTATCTTCTTTCCAAAGTGGTTCTCTGTATCCTCACCCGTTTCGAATCATTTGATAAAGATACTTCTGGGATACTCCCTATTGTGATAGAAATTCAATGTATTGCAGCATTTCCTGTAATTACTCGCTTTCTTTCTGAACTTCAAATCCTCAATTCAGAGATTGGGAGGTTGGCCACTTCTTCTTCATTAGTGTCAGAGGCCTGCTTCATTTTAAACATGACAATAACATTTTTCATAAAACTATCTTTAACAAAGTCTGTAGTAGTATCTATGGGGTCCTTCTTTTCCACCGTTCTACTTTTAATGTTCGTCATCTTTGTAGTTCACCCGGCTGCATTATGGGCAATTCAACAATCACCAGAAGGAAAACCTGTTCAAGAAGTTTATATTTGTGGAGTTCTTCTAACACTAATGTTGTGTGGACTCCTTGGTGAAATCATTGGCATAAATGCAATTGTTGTATCTTTCTTTATAGGACTAGCTATACCTGATGGTCCACCCCTGGGAGCAGCATTAGTAGATAAACTTGATTGCTTTGTTTCTGTAGTGTGCTTACCTATGCTTTTTATCATAGTTGGATTAAGGACAGATTTGTATGCCATACAAACAATGAAGAATATACTTGGAGTTCAACTGATTATTTGCACTTCTTTTTGTGGGAAAATTATAGGGGCTTTGTTGCCTCTCCTTTACCTTAGGATGCCAATTCGAGATGCCTTTGCTCTTGGTTTTATAATGAACATCAAAGGCACTGTTGAAATGGCCTTGTTGATTGACTTGAAATTCAGACGAATGATGAATGATGAATGCTTTGCACTTATGGTTCTAAACTTATTGTTTGTAACTGGGATTGTGTCCCCTATTGTAAAAGCTCTATATGATCCTTCTAGAAGGTTTCTTGCTTACAAAAGGAGGACAATTATGCATCACCACAGTGAAGAACAATTGCGCATACTAGCTTGCATTCACAAAGAAGAAAATGTTTTGGCTATTTTAAACCTGCTTTCAGCTTCCAACTCCAGTGAAACAAGTCCTATTGATTTAGTTGTGCTCCAACTTATTAAACTTGTGGGGCGATCTTCCTCTCTTCTTGTTGCACATATGCCATGCAAACTGTCAGGTCAACGTCCCACTCTAACTGAAAAGATTTTTAACTCATTCAACAAGTTTGAAGATGCACACAAGGGCAAGGTCACAGTTCATTGCTATAAAGGCATTTCTCCCTATTCTACAATGCACAATGATGTGTGCTACCTGGCACTTGAAAAGAGAACAACTTTTATTATATTACCCTTTCATAAACAGTGGATATTTGGAAGGACAACCGAGTCATCTTTTCCTTTTCAACAACTAAACAGGAATGTTTTAGACAAAGCTCCTTGCTCAGTTGGTGTCCTAGTTGATCGTGGCAATCAGAAGATGTTTTGGTGTGGCCACACAAAGGAGTCAATATATAAAGTTGCTGTGCTTTTCTTTGGGGGTGCAGATGATCGAGAAGCACTTTCATATGCAAGGCGTATGTTGGATCAACCTTGTGTCCGTATTACACTCATTCATTTTTCATCTCCAACTGACATTCTTGGAGGAACAGAAAGAAGCAAAATGCTTGACACACAAATCTTAAGTGGATTTAGGCTTAAGGCCTTCCGAAATGAGAGAGTTTCTATCAAAGATGAGACAGTAATGAATGGAAAAGATGTACTATCAATTGTTGAATACATGGAGGGTTGCTATGACCTTGTCATGGTTGGGAGGAAGCATGCAGATTCAAAATTAATGTCAGAACTCAACAAATTAAAGCATGGAGAATTGGGAGTTGTGGGAGAGATTCTTGTCTCTTTAAATGTTGGTGCCCAAACATCTATTTTAGTGGTGCAGCAACAAACCAGATTTTGGGGATCACGAGATCCAGAGGAGTCGACACATTTAAGAAAAACAGAAATATAG 2418 0.3879 MEVGQDNHIRGALQIGTDAQTSFGSSFICHSTVNQINSKGIWFGDDPLTYSLPIFLLQLFLMFVFTHVFYLILKPFGQPSFVSQLLGGVTLGPSFLGHNTTFAERLFPLKERSLLDTMTFFGFMLFIFLSGVKIDPTITFRSGRRTCALGILGYFVPYLLSKVVLCILTRFESFDKDTSGILPIVIEIQCIAAFPVITRFLSELQILNSEIGRLATSSSLVSEACFILNMTITFFIKLSLTKSVVVSMGSFFSTVLLLMFVIFVVHPAALWAIQQSPEGKPVQEVYICGVLLTLMLCGLLGEIIGINAIVVSFFIGLAIPDGPPLGAALVDKLDCFVSVVCLPMLFIIVGLRTDLYAIQTMKNILGVQLIICTSFCGKIIGALLPLLYLRMPIRDAFALGFIMNIKGTVEMALLIDLKFRRMMNDECFALMVLNLLFVTGIVSPIVKALYDPSRRFLAYKRRTIMHHHSEEQLRILACIHKEENVLAILNLLSASNSSETSPIDLVVLQLIKLVGRSSSLLVAHMPCKLSGQRPTLTEKIFNSFNKFEDAHKGKVTVHCYKGISPYSTMHNDVCYLALEKRTTFIILPFHKQWIFGRTTESSFPFQQLNRNVLDKAPCSVGVLVDRGNQKMFWCGHTKESIYKVAVLFFGGADDREALSYARRMLDQPCVRITLIHFSSPTDILGGTERSKMLDTQILSGFRLKAFRNERVSIKDETVMNGKDVLSIVEYMEGCYDLVMVGRKHADSKLMSELNKLKHGELGVVGEILVSLNVGAQTSILVVQQQTRFWGSRDPEESTHLRKTEI* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02328 805 PANTHER CATION/H + ANTIPORTER 28 787 - -
Lapu6g02328 805 Pfam Sodium/hydrogen exchanger family 60 446 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Lapu6g02328 805 Gene3D - 54 456 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02328 Lapu-Chr6 22809966 22813812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02328 15 805 Antiporter Super Family AT2G13620 37.272 3.16e-173 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02328 K26731 - gmx:102665255 1239.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02328 6 22809966 22813812 Lapu6g02328 6 22809966 22813812 ECH
Lapu6g02328 6 22809966 22813812 Lapu6g00016 6 203567 206113 PCT