Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02319 ATGCCTTCTACTACTCTTCAATGGCTAAGCCTTATCGGCATCATTTGGCTCCAAGCCATAATCGGGACAAACACTAATTTCCCTGCTTACTCTTCTCAGCTGAAGCAACTTCTTTCCATTTCTCAAGTCCAACTCAATAACCTTGCTTTTGCCTCTGATGCTGGCAAGCTTTTTGGCTGGTTTTCTGGCCTTGCTTCTATATACCTCCCCCTTTGGCTTGTTCTCTTGATTGGTTCAACTCTTGGCTTAATTGGTTATGGTGTGCAATATCTCTTCATAATCAACCAAATTTCCTCTTTGTCCTATTGGCATGTGTTCGTACTAACTTTTCTTGCTGGCAACAGTATTTGTTGGATCAACACAGTATGCTATGTTGTCACCATAAGGAACTTCTTATCAGATCGCCAAGTTGCTGTCGGAATAACAACTAGCTACCAAGGACTAAGTGCAAAAATTTATGCCAACATTGTTGATGCTGTTTCTCCTCAGAAGAAGGCTAGAGCATATCTCTTCCTGAACTCTCTCTTACCTGTAATAGTTTGCCTAATAGCAGCTCCTCTAGTCAGAGAATTTGATGCCATAAGTCCTAAGCACACTCGTGTTGGTTTTGCTGTGATATTTGTCATAACAATTTCCACTGGAATATATGCTGTGTTGAGCAGCTTGCAATTTGTCACAAGCAAAGCATCCTCACTAAGTATCATGACTGGTATTCTAGTGTCCCTTCTCTTGCCTCTTCTAGTGCCACTTTCAGTGAATATCAAGGAACTACAGGAAAATAGAGAAAAATTGAGAGTCTGCCATTTTACTATGGAGGAGAATAATAGTGAAGAGAGGGTGGAGAATGAGGTGAAAGAGGGTGAAGTTCAAGAAGAGGTTGGCATTATAGAAGAAGTTGGAGTGAAGTTGATGCTAAGAAGAATAAATTTCTGGTTATATTTCCTTGTCTATTTTTTTGGTGCAACTGTTGGTTTAGTATATCTTAATAACTTGGGACAAATAGCTGAATCCCGGGGTTGCTCCAATACTTCATCTTTGGTGTCTTTGTCATCATCATTTGGGTTCTTTGGCCGTCTCATGCCATCTCTTATGTACTATTTCTACAGGGGAAAGTGTAGAATTTCAAGACCTGCTTCTATGTTTGCAGTGATGGTTCCAACATCAGGTGCTTTTTTCCTACTTCTCAACAAAACTGACCTTGCCCTTTACGTCAGCACTGCAGTGATTGGAGTGTGTACTGGAGCAATAACTTCCATTGCTGTTTCCACAACCACAGAGCTATTTGGTACAAAGAATTTCTCAGTGAACCATAATGTGGTGGTGGCGAACATTCCTATTGGCTCCTTCATATTTGGATATTCAGCTGCACTTGTTTATCGTAAGGAAGGGCATGGTCATGATGAGCAAGGGCAATGTATGGGCATGGAATGCTACAGAAACACTTTTATCATCTGGGGTTCCTTGTGTTTCCTTGGAACTCTTTTGGCTTTGATTCTACATGCTAGGACTCGCAAGTTCTACTCACAAAAACAATAG 1536 0.4089 MPSTTLQWLSLIGIIWLQAIIGTNTNFPAYSSQLKQLLSISQVQLNNLAFASDAGKLFGWFSGLASIYLPLWLVLLIGSTLGLIGYGVQYLFIINQISSLSYWHVFVLTFLAGNSICWINTVCYVVTIRNFLSDRQVAVGITTSYQGLSAKIYANIVDAVSPQKKARAYLFLNSLLPVIVCLIAAPLVREFDAISPKHTRVGFAVIFVITISTGIYAVLSSLQFVTSKASSLSIMTGILVSLLLPLLVPLSVNIKELQENREKLRVCHFTMEENNSEERVENEVKEGEVQEEVGIIEEVGVKLMLRRINFWLYFLVYFFGATVGLVYLNNLGQIAESRGCSNTSSLVSLSSSFGFFGRLMPSLMYYFYRGKCRISRPASMFAVMVPTSGAFFLLLNKTDLALYVSTAVIGVCTGAITSIAVSTTTELFGTKNFSVNHNVVVANIPIGSFIFGYSAALVYRKEGHGHDEQGQCMGMECYRNTFIIWGSLCFLGTLLALILHARTRKFYSQKQ* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02319 511 CDD MFS_Mch1p_like 6 493 - -
Lapu6g02319 511 Pfam Nodulin-like 7 249 IPR010658 -
Lapu6g02319 511 SUPERFAMILY MFS general substrate transporter 8 505 IPR036259 -
Lapu6g02319 511 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02319 Lapu-Chr6 22749112 22751221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02319 1 510 Nodulin-like Gene Family AT2G30300 49.328 1.08e-158 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02319 - - gmx:100800763 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02319 6 22749112 22751221 Lapu6g02319 6 22749112 22751221 ECH