Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02305 ATGCCGGAGATCGACCAGGTGGCGGTGGAGGACACCGCCTTGTTCGGAAAGTACGAGCTCGGGCGCGTTCTCGGGTGCGGCGCCTTCGCGAAGGTGCACTACGCCCGCAACGTGCAGACGGGGCAGAGCGTGGCCGTCAAAATCATCAACAAGAAGAAGCTTAACGGAACGGGCCTCGCCGGAAACGTGAAGCGTGAAATCACGATCATGAGCAAGCTCCACCACCCCAACATCGTGCGTCTCCATGAGGTTCTCGCCACCAAAACCAAAATCTTCTTCATCATGGACTTCGTCCGCGGCGGAGAGCTCTTCGGGAAGATCTCGAAGGGTCGCTTCTCGGAGGATCTCAGCCGGAGGTATTTCCAGCAGCTTATATCCGCCGTCGGATACTGCCACTCGCGCGGCGTCTTCCACCGCGACCTCAAGCCGGAGAATCTCCTCCTCGACGAGAACGGCGATTTACGGGTCTCCGATTTTGGGTTGAGTGCCGTTAGGGACCAGATCCGACCCGACGGATTGCTCCACACGCTTTGCGGAACCCCTGCTTACGTGGCACCCGAGATTTTAAGCAAAAAAGGTTATGATGGTGCGAAGGTTGATGTTTGGTCATGCGGGGTGGTTCTGTTCGTCCTGGCCGCGGGCTACTTGCCGTTTAACGATCCGAATTTGATGGTAATGTACAAGAAGATCTACAAGGGAGAGTTCCGGTGCCCGCGGTGGATGTCGCCGGAGCTGCGGCGCTTCTTGGCGAAACTGCTGGACACCAACCCGGAAACGAGGATCACGGTGGAGGGCATGTTCCGTGACCCGTGGTTCAAAAAAGGGTACAAAGAGATAAAATTTCACGAGGAGGATTACACGTCCATGTCAGGTGTCGGGTTCGGGCCGAAAGACGAGCGGATAAAGAATTTGAACGCTTTTGACTTAATATGTTTCTCTTCGGGTTTGGATTTGTCGGGGCTGTTCGGGGACGCCGGCGAGGGGGACCGGTTGGTGACGCGGGAGTCGCCGGAGAAGGTGCTGGAGGAGGCGGAGGAGGCGGGGGCGGCTGCCAACATGGCGGTGCGGTGGAAGAAGGAGTGCGGGGTGGAGTTAGAAGAGCTAAATGGGAGGTTCGGGTTTGAGGTGGAGGTTTACCGGCTCACGGCGGAGCTCACGGTTGTGGATGTACGGAAGAGGGGTGGCGACGGCGTGACTTTTAAAAGCGTATGGGAGGAGAAGTTGAAGCCTTTGTTGCTCGGAGGTGCGACTACGTCGTATAACAGCGAAGAGGAACACCGAGAAGAGCAAAATCAACAACAACAACCAGAGTCGCAGCAGGTTGCCGATGACTGA 1335 0.5693 MPEIDQVAVEDTALFGKYELGRVLGCGAFAKVHYARNVQTGQSVAVKIINKKKLNGTGLAGNVKREITIMSKLHHPNIVRLHEVLATKTKIFFIMDFVRGGELFGKISKGRFSEDLSRRYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGDLRVSDFGLSAVRDQIRPDGLLHTLCGTPAYVAPEILSKKGYDGAKVDVWSCGVVLFVLAAGYLPFNDPNLMVMYKKIYKGEFRCPRWMSPELRRFLAKLLDTNPETRITVEGMFRDPWFKKGYKEIKFHEEDYTSMSGVGFGPKDERIKNLNAFDLICFSSGLDLSGLFGDAGEGDRLVTRESPEKVLEEAEEAGAAANMAVRWKKECGVELEELNGRFGFEVEVYRLTAELTVVDVRKRGGDGVTFKSVWEEKLKPLLLGGATTSYNSEEEHREEQNQQQQPESQQVADD* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02305 444 SUPERFAMILY Protein kinase-like (PK-like) 15 283 IPR011009 -
Lapu6g02305 444 Pfam NAF domain 302 356 IPR004041 GO:0007165
Lapu6g02305 444 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02305 444 Gene3D Kinase associated domain 1, KA1 303 414 - -
Lapu6g02305 444 FunFam Non-specific serine/threonine protein kinase 8 299 - -
Lapu6g02305 444 CDD CIPK_C 305 412 - -
Lapu6g02305 444 ProSiteProfiles NAF domain profile. 299 323 IPR018451 GO:0007165
Lapu6g02305 444 MobiDBLite consensus disorder prediction 415 444 - -
Lapu6g02305 444 FunFam Non-specific serine/threonine protein kinase 9 97 - -
Lapu6g02305 444 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Lapu6g02305 444 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 401 - -
Lapu6g02305 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Lapu6g02305 444 Gene3D Transferase(Phosphotransferase) domain 1 9 302 - -
Lapu6g02305 444 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02305 444 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02305 Lapu-Chr6 22630432 22632572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02305 1 413 CBL-interacting serine-threonine protein kinases AT2G30360 64.720 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lapu6g02305 Pkinase 9.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02305 - - gmx:100799169 724.931